Detailed information on CNT30604895


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30137691Oryza punctataLolium perenne14.3220.1390.3262reverse complement
CNT30104865Oryza punctataOryza longistaminata18.4828.7898.7580reverse complement

Expression of CNT30604895

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSPPHNFLFSGGSVGGGGGDGGNGGGGRRGGG

>peptide 2 (32 aa)
AAGAGAVAAVGSLLVVGHHGGHPLDRQLHLHD*

>peptide 3 (82 aa)
MIKISSPYSFLSLSLSLRSGQVRSEGLPPAEGSAPRPPCGAGLDAVAGEAMAPPLGGAAAWPRRTASTLAVFAAFQLARLGI*

Sequence

>CNT30604895
CGCAGCCGGCGCGGGGGCGGTCGCCGCCGTTGGCAGCCTCCTGGTAGTTGGACACCACGGTGGGCACCCGCTTGATCGTCAGCTTCATCTCCATGATTAA
AATCTCTTCTCCTTACTCTTTCCTCTCTCTCTCTCTATCTCTCCGGTCAGGTCAGGTCAGGTCAGAGGGGCTGCCGCCGGCCGAGGGAAGCGCCCCGCGG
CCGCCGTGCGGGGCTGGGCTGGACGCCGTCGCCGGAGAAGCGATGGCTCCCCCCCTTGGCGGCGCAGCTGCGTGGCCGCGCCGGACCGCTTCAACGCTAG
CCGTCTTTGCCGCCTTTCAACTCGCCCGTCTAGGGATATGAGCCCACCTCACAACTTCCTCTTCTCAGGCGGCAGCGTCGGCGGCGGCGGCGGAGACGGC
GGCAACGGGGGTGGTGGTAGGCGAGGAGGGGGG