Detailed information on CNT30604867


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697760Oryza punctataOryza sativa56.8180.3782.03217forward
CNT30555645Oryza punctataOryza glaberrima58.1243.1183.33222forward
CNT30450733Oryza punctataSaccharum spontaneum14.662092.8656forward
CNT30339139Oryza punctataEragrostis tef14.423.8189.0955forward
CNT30371486Oryza punctataOryza glumipatula58.1244.6783.33222forward
CNT30106587Oryza punctataOryza longistaminata58.957.9983.56225forward
CNT30104741Oryza punctataOryza rufipogon56.8165.7682.03217forward

Expression of CNT30604867

Peptides detected in this lncRNA

>peptide 1 (65 aa)
YDSKIHETRNNSMDLTKFIYQGKHDELSSCDQKHRWATTRNTDTCTQNYGNDRMMMMTMVARVTR*

Sequence

>CNT30604867
TTATGATTCCAAGATTCACGAGACAAGAAACAATTCGATGGATTTGACGAAATTCATTTATCAAGGCAAACACGACGAGCTTTCTTCTTGCGATCAAAAA
CACAGATGGGCAACCACACGGAACACAGATACTTGCACACAAAACTACGGTAACGATCGGATGATGATGATGACGATGGTAGCTCGAGTAACAAGATAGA
TAGATAGATAACTTGGCCACGTGGGCCCCACCGCTCAGTTCCTCCAGTTCCCGTCGGAGTTGCCGCCGCGGCTGCCGTAGCCACCGCCGTAGCCGCCACC
GCCGCCACGGCCGCCGCCGTAGCCGCCGACGAAGCAGCGGTACTCAACATCCGGCGCCGCCATGCTTCCCCCACCAAGAGAA