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Detailed information on CNT30604848


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000540, E-value = 1e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690834Oryza punctataOryza sativa71.8726.2396.17235forward
CNT30677945Oryza punctataSetaria viridis98.4721.2596.27322reverse complement
CNT3021516Oryza punctataCitrullus lanatus34.256.0991.07112reverse complement
CNT30730496Oryza punctataCorchorus capsularis103.6731.1984.66339forward
CNT30524944Oryza punctataPhaseolus vulgaris79.22680.31259reverse complement
CNT30199301Oryza punctataPisum sativum18.0420.1494.9259forward
CNT30492881Oryza punctataOlea europaea81.3541.2483.46266reverse complement
CNT30710142Oryza punctataGlycine max53.8239.4680.11176reverse complement
CNT30284960Oryza punctataTriticum aestivum64.2223.6592.86210reverse complement
CNT30384007Oryza punctataTriticum turgidum43.7316.3893.71143reverse complement
CNT30569656Oryza punctataActinidia chinensis26.9110.4592.0588reverse complement
CNT3083498Oryza punctataVigna radiata15.922.4192.3152forward
CNT30237740Oryza punctataBrassica oleracea64.5317.680.57211forward
CNT3077654Oryza punctataBrassica juncea64.5346.8980.57211reverse complement
CNT3018194Oryza punctataZea mays84.146.9396.73275reverse complement
CNT30610163Oryza punctataGossypium raimondii105.8165.0480.92346reverse complement
CNT30228329Oryza punctataAnanas comosus3758.4588.43121reverse complement
CNT30684722Oryza punctataTriticum urartu103.0631.5894.36337reverse complement
CNT30364733Oryza punctataSorghum bicolor73.0997.9592.05239reverse complement
CNT30355468Oryza punctataLactuca sativa103.3627.6484.91338reverse complement
CNT30416238Oryza punctataPapaver somniferum70.3430.0385.65230reverse complement
CNT30324879Oryza punctataAsparagus officinalis98.1791.4584.74321forward
CNT30150789Oryza punctataBrachypodium distachyon49.5419.6196.91162forward
CNT30101183Oryza punctataOryza rufipogon45.5725.2597.99149reverse complement

Expression of CNT30604848

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MESVQLEHDNVTQLVLVFGTEWKKGGDSRTRKRIPSKELNEEPYEVKISYTVL*

Sequence

>CNT30604848
CCCAGATTCCAAATGAAGAAATGGAAACTCGAAAAGGATCCTTCTGATTCTCAGAATGAGGGGCTAGGGGATTGATACCGAGAAAGATTTCTTCTTATTA
TAAGACGTGATTTGATCCGCATATGTTTGGTAAAAGAACAATCTTCTTCTTTAATCATAAATGGAAAGTGTTCAATTAGAACATGACAACGTGACTCAAT
TGGTCTTAGTCTTCGGGACGGAGTGGAAGAAGGGCGGAGACTCTCGAACGAGGAAAAGGATCCCTTCGAAAGAATTGAACGAGGAGCCGTATGAGGTGAA
AATCTCATATACGGTTTTGTAGAGGGG