Detailed information on CNT30604835


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT007302, E-value = 4e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597157Oryza punctataOryza meridionalis35.2913.0288.8990reverse complement
CNT30103267Oryza punctataOryza rufipogon100.3946.5587.11256reverse complement

Expression of CNT30604835

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MFIIACIFICKQIISQLGSTCSRDSDDLPAQDSPYSIILINLLLVEAVHVASRLIDTPI

Sequence

>CNT30604835
CTAGGGACTCATACGTAACATGGTTACAAGGGGATATGGGGTAAACAACATTCAAGGCATGGCATAACAACAAGTAGGATGTTTATCATTGCATGCATCT
TTATTTGTAAACAAATAATTTCGCAATTGGGATCAACATGTTCAAGGGATAGTGATGACTTGCCTGCTCAGGATAGTCCTTACTCTATAATCTTGATCAA
CCTTCTCCTCGTGGAAGCTGTGCACGTTGCCTCACGACTAATCGATACACCCATA