Detailed information on CNT30604686


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30577922Oryza punctataOryza barthii23.764.0487.572forward

Expression of CNT30604686

Peptides detected in this lncRNA

>peptide 1 (35 aa)
FSSVVGRTFGFSGYSLIVDISVILTVADFSKIIRT*

>peptide 2 (51 aa)
MMARSYQGRWNRDLGSPVDACGIRWTAAASLPLLHLFILVFCVDVNHAWSIR

>peptide 3 (49 aa)
VFFGRWSDVRVFRLFFDRGYFGYSNRCGFFEDYTNLKQERCWCQPLHVL*

Sequence

>CNT30604686
GGTTTTCTTCGGTCGTTGGTCGGACGTTCGGGTTTTCCGGTTATTCTTTGATCGTGGATATTTCGGTTATTCTAACCGTTGCGGATTTTTCGAAGATTAT
ACGAACCTAAAGCAAGAAAGGTGTTGGTGTCAACCTTTACATGTGCTATGATGGCAAGGAGTTACCAAGGACGGTGGAATAGGGACCTAGGTTCACCAGT
CGATGCGTGTGGGATAAGATGGACCGCCGCTGCTTCGCTTCCGCTACTTCATTTATTTATTTTGGTATTTTGTGTTGATGTTAACCATGCTTGGTCTATT
CGG