Detailed information on CNT30604623


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001340, E-value = 7e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526003Oryza punctataPhaseolus vulgaris61.5413.0792.97128forward
CNT30226590Oryza punctataHordeum vulgare45.6746.5794.7495forward
CNT30646904Oryza punctataRosa chinensis54.8141.0191.23114forward
CNT30581628Oryza punctataEchinochloa crusgalli42.7926.0294.3889forward

Expression of CNT30604623

Peptides detected in this lncRNA

>peptide 1 (43 aa)
TRNQHWWVGREYLGVRDNSIQGTRQNSPVTSGEGVPPRKRGSQ*

Sequence

>CNT30604623
ACCCGAAACCAACACTGGTGGGTAGGTAGAGAATACCTAGGGGTGCGAGACAACTCTATCCAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAG
GGGTGCCCCCTCGCAAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACTCAGGTCTACGCAAAATCATAAGACCATGTATGGGGGCT
GACACCTG