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Detailed information on CNT30604622


BLAST search results

BLAST vs Swiss-Prot:
sp|P08963|CB22_HORVU, E-value = 1e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440278Oryza punctataAegilops tauschii59.5956.9992.18550forward
CNT30685298Oryza punctataTriticum urartu59.5959.6591.45550forward

Expression of CNT30604622

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVMRASPKSAEVDAARAITGEESAMVAIASRCCTELD*

>peptide 2 (95 aa)
MAWTKNPNMENMARRPFLISFTLSSANASGPPSLKICDPALNHTASPNLTPFRARSSGKTQPSAPSIAQRQWITSSSRFLANVSGSAESPAVSQP*

Sequence

>CNT30604622
CTACTATATTCAATGAATAATCGTGTTGTTTGGTGTTGATCGTTAAAAAAAAAAAGAATAACAGACAGATAACCAAGACCAATTGTTGGGAACGAATAAA
ATCATTATTGCAAAAGCATCATCTTCTTCTTAGTGTACAACACCAACTCGATCATCATCTCGATCTCCCAGCCCAAAGACAACGAACTCGCTGGCCCAAA
TCCATATCCAACCACAACCACAACACTGCTGCTACCTAGCTACGCTCCCTCACTTGCCGGGCACGAAGTTGGTGGCGTACGCCCACGCGTTGTTGTTCAC
CGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAACCCAAACATGGAGAACATGGCGAGGCGGCCA
TTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGCCACCTTCGCTGAAGATCTGTGACCCGGCCTTGAACCACACGGCCTCGCCGAACTTGA
CGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATTGCCCAACGGCAGTGGATCACCTCCAGCTCGCGGTTCTTGGCGAACGT
CTCGGGATCGGCGGAGAGCCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGTGGCTCGCCGGAGAGCGGGCCGAGGTAG
AGGACGCGGTCGGGGCCGTACCACGGGCTGCCGGACACCGCCGGCTTCGGCTTCGCGGCGGACTTGCGCATGGTGATGCGCGCCTCGCCGAAGAGCGCGG
AGGTGGACGCCGCGCGGGCCATCACCGGGGAGGAGAGCGCCATGGTGGCCATTGCTAGCCGCTGCTGCACTGAGCTTGATTGAGCTGAGAGAGACGGCCG
AGTTCGCGTTGGTGATTGTGGTG