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Detailed information on CNT30604596


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 6e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30684689Oryza punctataTriticum urartu52.1249.4588.42406forward
CNT30582855Oryza punctataEchinochloa crusgalli44.032291.25343forward

Expression of CNT30604596

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVMRASPKSAEVDAARAITGEESAMVAIASRCCTELD*

Sequence

>CNT30604596
CTACTATATTCAATGAATAATCGTGTTGTTTGGTGTTGATCGTTAAAAAAAAAAAGAATAACAGACAGATAACCAAGACCAATTGTTGGGAACGAATAAA
ATCATTATTGCAAAAGCATCATCTTCTTCTTAGTGTACAACACCAACTCGATCATCATCTCGATCTCCCAGCCCAAAGACAACGAACTCGCTGGCCCAAA
TCCATATCCAACCACAACCACAACACTGCTGCTACCTAGCTACGCTCCCTCACTTGCCGGGCACGAAGTTGGTGGCGTACGCCCACGCGTTGTTGTTCAC
CGGGTCGGCGAGGTAATCGAGGCCACCTTCGCTGAAGATCTGTGACCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTCCGGGCGAGGAGC
TCCGGGAAGACGCAGCCGAGCGCGCCGAGCATTGCCCAACGGCAGTGGATCACCTCCAGCTCGCGGTTCTTGGCGAACGTCTCGGGATCGGCGGAGAGCC
CCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGCGGGCCGAGGTAGAGGACGCGGTCGGGGCCGTACCACGGGCTGCCGGACACCGCCGG
CTTCGGCTTCGCGGCGGACTTGCGCATGGTGATGCGCGCCTCGCCGAAGAGCGCGGAGGTGGACGCCGCGCGGGCCATCACCGGGGAGGAGAGCGCCATG
GTGGCCATTGCTAGCCGCTGCTGCACTGAGCTTGATTGAGCTGAGAGAGACGGCCGAGTTCGCGTTGGTGATTGTGGTG