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Detailed information on CNT30604590


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554808Oryza punctataOryza glaberrima27.5425.2792.91141forward
CNT3068090Oryza punctataLeersia perrieri27.1521.7284.17139forward
CNT30103497Oryza punctataOryza rufipogon27.5423.4292.91141forward

Expression of CNT30604590

Peptides detected in this lncRNA

>peptide 1 (75 aa)
LLEMSTRANYQIALSSAAATNSLSAAAPPPPPGAIPSIFSGGTEARRVELLPLPRPLPSTGSAAARSGDPSGPIR*

Sequence

>CNT30604590
CGCTTCTAGAGATGTCAACTCGCGCTAATTACCAGATTGCCCTCTCCTCGGCCGCAGCGACGAATTCCCTTTCCGCGGCGGCGCCGCCGCCGCCGCCAGG
TGCCATACCGTCGATCTTCTCCGGCGGCACCGAAGCACGCCGCGTCGAACTCCTCCCTCTCCCCCGTCCTCTCCCCTCTACTGGATCGGCCGCGGCGCGG
AGCGGAGATCCATCCGGGCCGATTCGGTGATTCCTTCGGCTTCCGTATGGAATTCGCAACTCGCTCGGACTGATTTCACTTTCTATCGAATTAGGGTAGA
AGACGCACCCATTATTCAAATGCTCCAGCTGCAGTATCAACATGTTGTTTTCTGCTAATTTTTTGAGTTTGATTTCTGCTCAGCTTATGTGATTTGATTG
AAATAACTAGCTTGGATCACCGTATGTATCAGTTAACTTCTTGTGTTGTTTGAATTCTGAAATTTTGTGCCTTATTGCCTTCTCTAGCGAAATTGATTCC
CACAAAGCAGCA