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Detailed information on CNT30604554


BLAST search results

BLAST vs Swiss-Prot:
sp|P12330|CB21_ORYSJ, E-value = 6e-113

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30664875Oryza punctataTriticum dicoccoides38.4145.2692.74358forward
CNT30345511Oryza punctataEragrostis tef59.4462.5390.25554forward
CNT30596866Oryza punctataOryza meridionalis56.1255.4694.26523forward
CNT30574920Oryza punctataOryza barthii59.6662.1291.91556forward

Expression of CNT30604554

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAWTKNPNMENMARRPFLISFTLSSANASG*

>peptide 2 (37 aa)
MVMRASPKSAEVDAARAITGEESAMVAIASRCCTELD*

Sequence

>CNT30604554
CTACTATATTCAATGAATAATCGTGTTGTTTGGTGTTGATCGTTAAAAAAAAAAAGAATAACAGACAGATAACCAAGACCAATTGTTGGGAACGAATAAA
ATCATTATTGCAAAAGCATCATCTTCTTCTTAGTGTACAACACCAACTCGATCATCATCTCGATCTCCCAGCCCAAAGACAACGAACTCGCTGGCCCAAA
TCCATATCCAACCACAACCACAACACTGCTGCTACCTAGCTACGCTCCCTCACTTGCCGGGCACGAAGTTGGTGGCGTACGCCCACGCGTTGTTGTTCAC
CGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAACCCAAACATGGAGAACATGGCGAGGCGGCCA
TTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCCTCGGGGTAATCGAGGCCACCTTCGCTGAAGATCTGTGACCCGGCCTTGAACCACACGGCCTCGC
CGAACTTGACGCCGTTCCGGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATTGCCCAACGGCAGTGGATCACCTCCAGCTCGCGGTTCTT
GGCGAACGTCTCGGGATCGGCGGAGAGCCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGTGGCTCGCCGGAGAGCGGG
CCGAGGTAGAGGACGCGGTCGGGGCCGTACCACGGGCTGCCGGACACCGCCGGCTTCGGCTTCGCGGCGGACTTGCGCATGGTGATGCGCGCCTCGCCGA
AGAGCGCGGAGGTGGACGCCGCGCGGGCCATCACCGGGGAGGAGAGCGCCATGGTGGCCATTGCTAGCCGCTGCTGCACTGAGCTTGATTGAGCTGAGAG
AGACGGCCGAGTTCGCGTTGGTGATTGTGGTG