« Back to Oryza punctata search


Detailed information on CNT30604550


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6END7|RK14_ORYNI, E-value = 1e-47

BLAST vs NONCODE:
NONOSAT001021, E-value = 0.0

Expression of CNT30604550

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLRIGTNDSNSSTPTNQSTFCTNFTNRSSYFHISVFLS*

>peptide 2 (30 aa)
MFSFFFSFWILKHIRETQSTNFLFDLYLVY*

>peptide 3 (78 aa)
MYPLLEFFIWNLDIFAGTFFYFLESQVLFSKDYPCLCLCFGLEQMTLIRPRLRISRHFVQILRTEALIFIFPYSFLKL*

>peptide 4 (61 aa)
LSYVNQFLYSFCHILLSHKYELEITKRKKRYKDIRFRVKCILYLNFLFGIWTFSRVLFFTF*

Sequence

>CNT30604550
CTTTCCTACGTGAACCAATTTTTGTATAGCTTTTGTCATATTTTATTATCTCATAAATATGAGTTAGAAATAACAAAAAGAAAAAAAAGATACAAAGATA
TCCGTTTCAGGGTAAAATGTATCCTTTACTTGAATTTTTTATTTGGAATTTGGACATTTTCGCGGGTACTTTTTTTTACTTTTTAGAAAGTCAAGTTCTT
TTTTCGAAAGATTACCCCTGTCTTTGTTTATGCTTCGGATTGGAACAAATGACTCTAATTCGTCCACGCCTACGAATCAGTCGACATTTTGTACAAATTT
TACGAACAGAAGCTCTTATTTTCATATTTCCGTATTCCTTTCTTAAACTATGAATTTACTCTTTTGGAAAAAATAAGTCTCTTTGTTTAAATTTTAGAAC
TTTGAATTTATTACCCTAGAAAAAAAAAGAAAAACCTAACCCTTTGAATCTTTGGTATCCTTCAAATCTTCGGTATCCTTCGAGTCTTCGGTACGCTTCG
AATCCTTATGGGGAAGTCTATAAATTATATGCCCCTTGCTTTAATTATAACGACTTAATACTTCAATTTTGACCCTATCCTCCATCAGTATTCGTATAGA
ACTAGACCAGATCTTTCTTTGAAATATAGTCCAGGATGATGGTGTCATTCTCTAGGCGAACGCCGGAACATTCCTTTGGGTAGGGCTTCCATAACTAAAC
CCTCAAAAGTAATTTTTGCTTCTCTCGGGTTTTTTTTTTCTCTCCTATTTTTCTTTTCTGTCATATTTTTTTCTCCTATTTTTCTTTTTTTATTTTCAAA
TAAAAAAAACGTTGTATTTTTGTTTGAAAAATAAGAAGTTCAAGATAGAATTTGGGTACTATAACTATAGGTGGGGCGATTACCGCTATAGGCGGGGCGA
TTACCATATATAACATAAGACTTCTCCCCTATTCTTTTTAGTAGAGCTTCTCGATCTGACATTATACCTCTAGAAGTAGAAATAATAGTAATTCTGTTTC
CACCCAAAACCTTAGGAATTTCTTGATAATTGGCATAAATTCTTAAGCCAGGTCGGCTGATACGCTTTAAAAAGTTCTAGTTCTATATATTCCCTTTCTA
GTCTTTCTCTTTAATTGTTGCAAAATTGAAACCAAGAAATATCTATTACTTTCCTGATGTTTCCAAACACTTTCAATAAAACCCTCTCGTAGAAGTATTT
TAACAATGTTTTTGGTAATATTTGTAGGTACTACCCGAACAGTTCCTTTTTATTATGGCTGCGTTTCTTCTAGAGGTTAGTACATCAGCAATAGTGTGCT
TGCCCATAAGAATCTAATTCTAGCTTCCTCCTAATTTTTCTATAATCAACATGTTCTCTTTTTTCTTTTCGTTTTGGATTCTAAAGCATATACGTGAAAC
ACAATCTACTAATTTTTTATTCGACCTATATCTTGTCTACTAGTATTTATAATACTTCAGGAGCTAATGAAACTATTTTAGTAAAATTCAATTCTCTCAA
TTCCTCGGCGATCGCGCCAAAAACGCGAGTTCCCTTTGGATTTCCTTTTTGATCAATGATAACCGCTGCATTATCGTAATAGCATATTATTATACCGTCT
TCGCATTTGAACTCTTTACATGTACGTACAATTACAGCTCGAATTACTTCGGATCTTTCTAGAGGCATTTGGGGAACTGCATCTTTGATTACAACAACAA
TAACATCACCAGTACGTGTTTCCGTCGGTCTTACTGTAACCGGTTCGTTGGGAAATATACTTACCCAGATTTTTCCACCACGACGTGCATATCGTGTCAT
TGCTCTTCGTCCTGCTTCTATCTGCCTCGCCGTAATCCAAGTGGGTTCAAGTGCTTGAAGAGAATATCTACCAAAACAAATACGATTGCTTCGGTAGGAT
TTTCCCTTCATTCTTCCTCTATGTTGTTTATGAAATCTGGTTCTTTTCGGGTTATACATAGCAATTTTACTAAAAGATTTCTCAATTTTCATTAAATCTT
ATAGAAAGAGGTAGAATTTCTTCTTTTTTTCAGGGATTTTAGGGAAAATAAGGCTCTTGTCATTTTTTATTCTATTACTGAACAGAATGGGAAGACATGG
TTGGTTATTCTTCATCTACGAATATCCAAATTTTAATTCCTAATACTCCATAGATAGTTCGAATTGAATAGCAGTACTAATCAATTTTAGC