Detailed information on CNT30604523


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30118101Oryza punctataOryza nivara43.2513.8887.26157forward

Expression of CNT30604523

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSMPCELRSDLPLAYCNLQVVIILTSKVLECETSCCVVALMLY

>peptide 2 (49 aa)
RDYLGTEGVLGVGDILAQVLPSSSVEMAACLLLSSNSPRKSALLQFTSQ*

Sequence

>CNT30604523
AGGGACTATTTAGGGACGGAGGGAGTATTAGGTGTTGGTGATATCTTGGCACAGGTACTGCCCAGTTCTTCAGTTGAGATGGCAGCATGCCTACTTCTAA
GTTCTAACTCTCCCAGGAAGAGTGCTCTTCTGCAGTTCACAAGTCAGTAAGGAGAAGGTGCTGATTGAGGGAGAAACCTGACTCTCGTCAGAACAGGCAG
CCAGCTGCTGAATGATCATGTCAATTTGATCAATGTCCATGCCATGCGAATTAAGATCTGATTTGCCCCTTGCATATTGCAATTTGCAAGTAGTAATAAT
ACTAACTAGCAAAGTATTAGAATGCGAAACTTCTTGTTGCGTCGTGGCACTGATGTTATATGT