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Detailed information on CNT30604507


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695816Oryza punctataOryza sativa100.6231.5594.75648forward

Expression of CNT30604507

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLYLPWIPRLSFSHQEPTSNQEQESTAILFSSP*

>peptide 2 (36 aa)
MLPCRGKANAVPCEQLPPQGLLSPILSLQQTAGTTR*

>peptide 3 (41 aa)
MSSESLQEIFGTYSAIEALKKFARLECPEDDLDSPCEKHDK*

Sequence

>CNT30604507
GATGTCCTCCGAAAGTTTGCAAGAGATCTTTGGTACATATTCAGCAATCGAAGCACTCAAGAAATTTGCAAGACTAGAATGCCCTGAAGATGATCTCGAC
AGCCCCTGTGAAAAACATGACAAATAGATTTTCTCAGTTTGGGAAATTTTGACACAAAACATATGTTCGTGCATGAGCTAAAACCTGTACTTTGAAGGGG
AAAAAGGTATAACTGAAACTAGCACAAACTGTATAGTTCTGAAAATTGATCTATCCAAGGTGGCAAGGCGTGTACCTGGGTAGAAACACGAGGGGATACA
CCTAGGTATTGATCAAATGCTGCCCTGTAGAGGGAAAGCAAATGCAGTTCCTTGCGAACAACTTCCTCCTCAAGGGCTGCTATCTCCCATACTAAGTCTG
CAACAGACTGCAGGAACCACAAGATAAGAAGATGAATGGCTAGCTCTTGGTGTTTCTGCACAACAAATGGTTGTTTCCATAAACACCTCTGATGCTGTAT
CTTCCATGGATTCCTAGACTGAGCTTCAGTCACCAAGAACCTACCAGCAATCAAGAGCAAGAAAGTACTGCAATCCTATTCAGTTCTCCATAACTAGCTG
AAGAGGAGAAGAATAATCCAATTACCGAAACTAATGAACTTACC