Detailed information on CNT30604398


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H5N9|PIP21_ORYSJ, E-value = 4e-139

BLAST vs NONCODE: nothing found

Expression of CNT30604398

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MVAFGLGLVRISPPINTKSPGAYFDKMCAKSAKADKHPNASSRLVTSTQREERKTLMPRCPPYSQPQMFTTI*

>peptide 2 (66 aa)
VVPRLLVVEDDGRSDAPRRVDAGAGDRDRRKVDHEHGEADWQGRQDLVRDTHTRPQISPDLQELGE*

>peptide 3 (30 aa)
MARTRDTLRARKSPNVTAGLMWPPEIPAVQ*

>peptide 4 (32 aa)
MKHNTTQLIKLCFCQTKPHPCLTCVGCLFSAT*

>peptide 5 (35 aa)
MLLFLVRTRNSFGKNRGKGEEFILAVLAKFIMEIT*

>peptide 6 (37 aa)
MVINISGLLGSKLVAKKPTQAFLSRNAPFNKELERTS*

>peptide 7 (38 aa)
MLVVRLKHLPSLKLQLSKHNFQREEKKNWESSDAYRDM*

>peptide 8 (38 aa)
MFNGHQHQWTIREQVSGQKAHTSLLVTKCPFQQGTGTN*

>peptide 9 (39 aa)
MLTGTCESRALRLGSVAEKTVYTSTKVPMISAARPVPLE*

>peptide 10 (39 aa)
MPLSTRNWNELARAPNGCFWPWLSAHFTPHKHQVTRGIF*

>peptide 11 (47 aa)
LCHAFSLLKMTAAPMLLAGLMPVPVIGIVARWTMNTAKPIGRGAKTW*

>peptide 12 (42 aa)
MKIMPPNAHAMPSTPTPPHAASAPDADVSVWCLYPMTVATVM*

Sequence

>CNT30604398
GGTTGTGCCACGCCTTCTCGTTGTTGAAGATGACGGCCGCTCCGATGCTCCTCGCCGGGTTGATGCCGGTGCCGGTGATCGGGATCGTCGCAAGGTGGAC
CATGAACACGGCGAAGCCGATTGGCAGGGGCGCCAAGACCTGGTGAGAGACACACACACAAGACCACAAATTAGCCCGGATTTGCAAGAGTTAGGCGAGT
GACCAAAACTATAACTATTCAGCAACAAAGGAACTGTCGTTTTAACAGTGATGAAGCACAATACAACACAACTCATAAAACTGTGCTTCTGCCAAACCAA
ACCACACCCCTGCTTGACATGTGTAGGGTGTCTCTTTTCAGCCACATGACCCATGTTTAATGGTCATCAACATCAGTGGACTATTAGGGAGCAAGTTAGT
GGCCAAAAAGCCCACACAAGCCTTCTTGTCACGAAATGCCCCTTTCAACAAGGAACTGGAACGAACTAGCTAGAGCACCAAATGGTTGCTTTTGGCCTTG
GCTTAGTGCGCATTTCACCCCCCATAAACACCAAGTCACCAGGGGCATATTTTGACAAGATGTGTGCAAAATCTGCAAAAGCAGATAAGCACCCAAACGC
TTCTTCACGCCTTGTCACCTCCACCCAAAGGGAAGAAAGAAAGACTCTCATGCCAAGATGCCCACCTTATTCACAACCTCAAATGTTCACCACCATATAA
AGTGACCTATCCATTTCCATTCTCCAAGAAAAAAAAAAGAAACTACTCTACAATTTCACCTAACAATATGCTCTTGTTTTTAGTGAGGACACGAAATAGT
TTTGGAAAAAACAGAGGGAAGGGTGAAGAATTTATACTGGCGGTCCTTGCAAAATTCATCATGGAGATCACATGAAAACCGGCCCGGGTACCGGGTACAC
CTAGCCGCTGCCGCTGCAGCCTGCACGAACCAGCTCACCCGGTCTGGACCATGCAGTACACCGGACCAGCTCAGCCTTTTTGGCTTTGCTAGGGCCACAT
GTAGTACGCGCCCGCACAGCCGTGCTACCGTGATGGGATGGAACAGTGATAGCAGCAGACGTGACAAATGAAATACAGTAAATAAGTTAATAGAGTATTT
TTAATCCTCTATGTCCTTCTTCCGTGTGTACTAGGCTCATCTTGAATCTTCTACTACCCAAAAAAAAACTACTTTCAATTATGTGGTGGGCTATCTATTG
CTAGTGCTACTGTACTGGAGTGATACGGAGTAGAACGTTAAGAGCAAATTCAACACTACGGGATGCTTAATAATATGCTCTTGTAGTACTATCTGGAAGA
GATCTGAAAATTGACAATCTAGGCATGAAAGTAGCAATATAACTATAATTTTGGATTTTTTTCTTCCGAAAAGAATCAAGAGTTTTTCAAAGAAATTATT
GCTTCTGTTCAATATGCGCTTGCTTTTTTTTTAATCAAAGAGGATATAGGATATTCTTCCACTGCTTTTCATTCCTTTTTGTTCACATCTGTCATTCTTC
CGATCTATACAAACTAATATTCTCATACTAACACATGCATGTTAGTTGTTAGATTAAAGCATCTACCATCACTTAAGCTCCAATTAAGCAAGCACAATTT
TCAAAGAGAAGAAAAGAAAAATTGGGAGAGCTCCGATGCTTACCGGGACATGTGAGTCGCGGGCGTTGCGCTTAGGGTCGGTGGCGGAGAAGACGGTGTA
CACGAGCACGAAGGTGCCGATGATCTCGGCGGCGAGGCCGGTGCCCTTGGAGTAGCCGGCGGAGAGCGTGTTGGCGCCGCCGCCGTACCTGTTGAAGTAG
GCGCTCTGGAACGCCTTGACGAGGCCGACGCCGCAGATGGCGCCGAGGCACTGCGCCACGATGTAGAGGATGGCGCGGACCAGGGACACCTTGCGCGCCA
GGAAGAGCCCGAACGTCACCGCCGGGTTGATGTGGCCGCCGGAGATTCCGGCGGTGCAGTAGACGAGGATGAAGATCATGCCACCGAACGCCCACGCGAT
GCCGAGCACGCCCACGCCGCCGCACGCCGCGTCGGCGCCGGACGCGGACGTGTCCGTCTGGTGCTTGTACCCGATGACGGTGGCCACGGTGATGTAGAGG
AAGAGCAGCGTGGCGATGAACTCGGCGATGACGGCGCGGTACAGCGACCACGAGCCTAGCTCCGCCGCGTCGATCAGCGGCGCCGGTGGCGGGTCCGTGT
AGTCCTTGGCAGCGAACTCGCCGGCGGCGCCGCCGCTCTCCATCACCTCGTCCTTCCCCATGCCCAACCTAGCTTAGCTAGCTAGCTTGCTCTCGCCGCC
GCGGGAAGCTTAACGGGAGGAGTGACACGACCAACCTTGCAAGCAATGGTGGAGCTGAGCTGAG