Detailed information on CNT30604317


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30576123Oryza punctataOryza barthii2.820.3290.251reverse complement

Expression of CNT30604317

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLREVKPTASSSPISSTSRTPICCSSSSSSRTT*

>peptide 2 (31 aa)
MVGRYSQWWQDHLCDQCRIQKKDFNDIARQG*

>peptide 3 (54 aa)
CYCTDQAWHFLSPLLPPHLRSPHLLSPISSAAPVPVRPTPPTPPLAHLPHQFLQ*

>peptide 4 (35 aa)
ATVQIKPGIFSLLFFLLISVLHISSPPSLLQLRCR*

>peptide 5 (73 aa)
MRSPFLPSNDGFCSWKYRNRPSTIIGEAYGTLLTMEFGKHINQNRDPIRSRFDDMRKSWKQSAHRLRVCIGRY*

>peptide 6 (58 aa)
LLYRSSLAFSLSSSSSSSPFSTSPLPHLFCSSGAGEAYATYATPCSSPPPIPSINQDA*

Sequence

>CNT30604317
TGCTACTGTACAGATCAAGCCTGGCATTTTCTCTCTCCTCTTCTTCCTCCTCATCTCCGTTCTCCACATCTCCTCTCCCCCATCTCTTCTGCAGCTCCGG
TGCCGGTGAGGCCTACGCCACCTACGCCACCCCTTGCTCATCTCCCCCACCAATTCCTTCAATAAATCAAGATGCTTAGAGAGGTCAAACCCACTGCTTC
TTCCTCGCCAATCTCCTCAACCTCCAGGACACCGATCTGCTGTTCTTCATCCTCTTCTTCAAGGACGACCTGATCTGCTACTACAGCTTCTTCTTCCTCT
ACTTCAAGTGCTGCTGCTGCTCTACCTCTGCACCTAAAATTTTTGTTGCTGCACGGTTTCGTTCTTCTTCCTCCTCCTTGTAATATTTCAGATTTGTTGA
GTATTCAGATACTTGGAAACCTGTGACCAGTGATATGAAATCTGTGTTAGTACGTGTTAATTGCATGAATTCCGGGTTGTTCTGAGATATCAGAGTAATT
AAAACCTGTGATAGTTAATTTGTGAATCATCCTATTACCCGTTGGTATTTGATTTAGTTTAATTTTGTTTCCTGCCAATTATTGTTAACTCTAGTAGCCA
TAGCCCCTGAGGAGAACATGACACTCGCCACTACTCGGTGGCACCCGTGAGCTTGCGGGGTGCGTAGCACAATCAAAAGAGTACCCTCGACAGTAATAGT
TTTTAGCTCTATATACACACATGGAGGAATACCCGTACTGAGCTGTCATCATCAGCGGTCCACCTCTACAGTTCCGTGGCATATAGTATCACTTAATGGT
ATTTAATAATCTAAGAGCGTCGCTTACATTACTAAATATTACTCTACTTATCTGCAGATAAAATAGAGCAATCAACTGCATGAACAATAAACCAATACCA
TTACGTCTCTTTGGTAAGCTAGTCATATAATTAATACGAAATTGGTATATGTATAATTAAAACAAGTAAAGTAAAGGACTGAAATAGTTGCTAGAACCAT
ACTTGAATTCTCTGGAAGACTTGAAGAACTCAATAACTATTCTAATTCTAACTCCACTAGTGCTACAATAAAGTAAACTACTAAGGAAAGTTTTTGTTGA
TTAATCTTGGTGTGTCTTGAAATGAAAAATGAGAAGTCCTTTTCTACCTTCAAATGACGGTTTCTGCAGTTGGAAATATCGGAATCGCCCTTCAACCATC
ATTGGGGAGGCATATGGGACATTGTTGACGATGGAATTTGGTAAGCATATAAATCAGAATCGAGATCCAATCCGAAGCAGATTTGATGATATGCGGAAAT
CTTGGAAACAGAGTGCGCATCGGCTGAGAGTCTGTATCGGCCGATACTGAGTTCGATATGGTTGGTCGATACAGTCAATGGTGGCAAGATCATTTATGTG
ATCAATGTCGGATTCAGAAAAAGGACTTCAATGACATTGCCAGACAAGGATAGAGTCCGAAATAAGTAATTGTATCTATTAATTAACATTTTATATTTCT
TTATAGATATTTTCAGTAAGAGCCACCTAAGGAACTTGTTTGTTGGTTGGAGTTGTATTAGGAAAGTATGGGTCGTGTCCGTTATGGATAAGTTGTATCT
TCGGGTATAAAATAAGCCCGAGGTCATGTAAATAATTTACATTAGTTCAATACAATCTCGGTGCATCACTGACCGTTTTGTTACTTTGTTTCGACGAGTT
CTTGCTTTCGAGTCGAGCTGCATCGGTTTCGATCTTCGACAAAGAGAACCAAATCAACTGGCACGCCCTTGAACCAGAAAGCAAGCTTTGGACCTGCACT
AGAGTAAAGCAAATCTCTC