Detailed information on CNT30604308


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116885Oryza punctataOryza nivara28.2624.6884.62156forward

Expression of CNT30604308

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SRHGAYEETAKSSSLQNLEREVASAKKKTGGIWLLTRYGTA*

Sequence

>CNT30604308
CAAGCAGACATGGAGCTTATGAAGAGACAGCAAAAAGTAGCTCACTTCAGAATTTGGAGAGGGAAGTAGCTAGTGCAAAGAAAAAAACAGGTGGAATTTG
GCTATTGACAAGATATGGAACAGCATAACAATTGACAAAGTATGCATGAGCATATGAGCCAGCACACTATATATGCTCTGTGAGACTGACTACCGTGTAC
TGGCTGATTGGGAAGCTGTGTTCATACTAGTATGAATTTCAGGACTGAAGAAACATGGTACAGCTCATCGTGCAATTGATACTACTAGCAGTTTTTTTGG
TCTAACAATATACAGAGTTGGGTTATGCACTATTACATATGACTCTCAATCTGCCATCCCTTAATAAGATCAAGGTTGTTTTCAACGCAAAATATCAAAC
ATGAGGACACTGAACCTTTGGTCGTGCAGCTGGGAGGGGAGCAAAGAATGAAATAAAGCAAGCAAAAACCAACCTCGGCGTAGTAATCCCTCCAGACGCG
GCGCGCGATCCGGTGGCCGCCGAGGTCGAACGCCTTGAACCTTATCCGCCCG