Detailed information on CNT30604265


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100448Oryza punctataOryza rufipogon4.525.689275reverse complement

Expression of CNT30604265

Peptides detected in this lncRNA

>peptide 1 (45 aa)
FLSPLLPPHLRSPHLLSPISSAAPVPVRPTPPTPPLAHLPHQFLQ*

>peptide 2 (33 aa)
MLREVKPTASSSPISSTSRTPICCSSSSSSRTT*

>peptide 3 (89 aa)
MRSPFLPSNDGFCSWKYRNRPSTIIGEAYGTLLTMEFECASAESLYRPILSSIWLVDTVNGGKIIYVINVGFRKRTSMTLPDKDRVRNK*

>peptide 4 (31 aa)
MVGRYSQWWQDHLCDQCRIQKKDFNDIARQG*

>peptide 5 (50 aa)
FSLSSSSSSSPFSTSPLPHLFCSSGAGEAYATYATPCSSPPPIPSINQDA*

Sequence

>CNT30604265
ATTTTCTCTCTCCTCTTCTTCCTCCTCATCTCCGTTCTCCACATCTCCTCTCCCCCATCTCTTCTGCAGCTCCGGTGCCGGTGAGGCCTACGCCACCTAC
GCCACCCCTTGCTCATCTCCCCCACCAATTCCTTCAATAAATCAAGATGCTTAGAGAGGTCAAACCCACTGCTTCTTCCTCGCCAATCTCCTCAACCTCC
AGGACACCGATCTGCTGTTCTTCATCCTCTTCTTCAAGGACGACCTGATCTGCTACTACAGCTTCTTCTTCCTCTACTTCAAGTGCTGCTGCTGCTCTAC
CTCTGCACCTAAAATTTTTGTTGCTGCACGGTTTCGTTCTTCTTCCTCCTCCTTGTAATATTTCAGATTTGTTGAGTATTCAGATACTTGGAAACCTGTG
ACCAGTGATATGAAATCTGTGTTAGTACGTGTTAATTGCATGAATTCCGGGTTGTTCTGAGATATCAGAGTAATTAAAACCTGTGATAGTTAATTTGTGA
ATCATCCTATTACCCGTTGGTATTTGATTTAGTTTAATTTTGTTTCCTGCCAATTATTGTTAACTCTAGTAGCCATAGCCCCTGAGGAGAACATGACACT
CGCCACTACTCGGTGGCACCCGTGAGCTTGCGGGGTGCGTAGCACAATCAAAAGAGTACCCTCGACAGTAATAGTTTTTAGCTCTATATACACACATGGA
GGAATACCCGTACTGAGCTGTCATCATCAGCGGTCCACCTCTACAGTTCCGTGGCATATAGTATCACTTAATGGTATTTAATAATCTAAGAGCGTCGCTT
ACATTACTAAATATTACTCTACTTATCTGCAGATAAAATAGAGCAATCAACTGCATGAACAATAAACCAATACCATTACGTCTCTTTGGTAAGCTAGTCA
TATAATTAATACGAAATTGGTATATGTATAATTAAAACAAGTAAAGTAAAGGACTGAAATAGTTGCTAGAACCATACTTGAATTCTCTGGAAGACTTGAA
GAACTCAATAACTATTCTAATTCTAACTCCACTAGTGCTACAATAAAGTAAACTACTAAGGAAAGTTTTTGTTGATTAATCTTGGTGTGTCTTGAAATGA
AAAATGAGAAGTCCTTTTCTACCTTCAAATGACGGTTTCTGCAGTTGGAAATATCGGAATCGCCCTTCAACCATCATTGGGGAGGCATATGGGACATTGT
TGACGATGGAATTTGAGTGCGCATCGGCTGAGAGTCTGTATCGGCCGATACTGAGTTCGATATGGTTGGTCGATACAGTCAATGGTGGCAAGATCATTTA
TGTGATCAATGTCGGATTCAGAAAAAGGACTTCAATGACATTGCCAGACAAGGATAGAGTCCGAAATAAGTAATTGTATCTATTAATTAACATTTTATAT
TTCTTTATAGATATTTTCAGTAAGAGCCACCTAAGGAACTTGTTTGTTGGTTGGAGTTGTATTAGGAAAGTATGGGTCGTGTCCGTTATGGATAAGTTGT
ATCTTCGGGTATAAAATAAGCCCGAGGTCATGTAAATAATTTACATTAGTTCAATACAATCTCGGTGCATCACTGACCGTTTTGTTACTTTGTTTCGACG
AGTTCTTGCTTTCGAGTCGAGCTGCATCGGTTTCGATCTTCGACAAAGAGGTAAAACTTATTATGGC