Detailed information on CNT30604174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067415Oryza punctataLeersia perrieri10.422.0791.8449forward

Expression of CNT30604174

Peptides detected in this lncRNA

>peptide 1 (58 aa)
GEVGEATRRRRKRTPFSLAGLLGWWATDWGAALPFFFIASSTRRHHLSLPEMSCRIPC*

>peptide 2 (65 aa)
MEHFRWLHRDEHRWSLAWTRKQQHMRPIYGLMNRMGLMCIDTLPRIIPVNTYPVDLYSVLFSGII*

Sequence

>CNT30604174
CGGCGAGGTAGGAGAAGCGACGAGGCGGAGGAGGAAGAGGACGCCATTTTCGCTGGCTGGCCTCTTGGGCTGGTGGGCAACTGACTGGGGGGCAGCCTTG
CCCTTCTTCTTTATCGCATCGTCGACTCGTCGTCATCATCTATCGCTCCCAGAGATGTCCTGCCGGATCCCCTGTTGAAAGGTCTGTATCTGCTGTTTGG
GTCTTTGATCGATGCTGCTTTGGAAGGATTTCTAAACGATCCAAACATGGAGCATTTTCGCTGGCTGCACCGAGATGAGCATCGCTGGAGCTTAGCGTGG
ACAAGAAAACAACAGCACATGAGACCAATTTATGGATTAATGAATAGGATGGGATTAATGTGCATTGATACGCTACCTCGTATTATTCCTGTAAATACTT
ATCCTGTAGACTTGTACTCCGTATTATTCAGTGGAATCATTTAATCAATGAATCATATAGTCACTTCAGTG