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Detailed information on CNT30604126


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30476145Oryza punctataSaccharum spontaneum78.8675.584.27903forward
CNT3067522Oryza punctataLeersia perrieri78.6972.992.01901forward
CNT30338865Oryza punctataEragrostis tef78.4372.4885.3898forward
CNT30368619Oryza punctataSorghum bicolor78.5277.984.54899forward

Expression of CNT30604126

Peptides detected in this lncRNA

>peptide 1 (52 aa)
SFVMVANIYQGKKKRVQEQMYHRNKLRDLLTSFITEINLLRSKCLHARFGTR*

>peptide 2 (56 aa)
MFARTVRDKMIVTQTKTLKLTRPQLHYQAQRTSEPNLPRTYRPPRRRSTRCKVDSF*

Sequence

>CNT30604126
CTCTTTTGTTATGGTAGCTAACATATATCAGGGTAAAAAAAAACGAGTACAAGAACAAATGTATCATCGGAATAAGCTAAGAGATTTGCTAACTTCATTT
ATAACTGAAATCAATCTGCTGCGCAGCAAATGTTTGCACGCACGGTTCGGGACAAGATGATAGTAACACAAACGAAAACTTTGAAACTAACGCGACCACA
ACTTCACTACCAGGCGCAGCGAACATCTGAACCAAACCTGCCGAGAACTTACAGGCCACCACGGAGACGGAGCACCAGGTGCAAAGTGGATTCCTTCTGA
ATGTTGTAATCTGCTAAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCTTTG
CTTTCACGTTGTCAATCGTGTCTGACGACTCAACCTCCAGGGTAATGGTTTTGCCGGTCACAAAGATTTGCATTCCACCCCTGAGCCTGAGCACTAGGTG
AAGGGTTGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCC
TCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCGGAAGACTCGACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCA
TGCCTCCCCTCAGCCTAAGCACAAGGTGTAGAGTGGACTCTTTCTGAATGTTGTAGTCTGCCAAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAGAT
AAGACGCTGTTGATCTGGGGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGTCTTT
CCTGTCAAGGTCTTCACAAAGATCTGCATTCCTCCCCTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCAAGGGTGCGGC
CATCCTCGAGTTGCTTGCCCGCAAAGATGAGGCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTATCTGA
GGACTCAACCTCGAGGGTTATGGTCTTGCCAGTGAGTGTCTTCAC