Detailed information on CNT30604071


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30597073Oryza punctataOryza meridionalis93.0123.0387.79213forward
CNT30109874Oryza punctataOryza longistaminata93.4519.9682.24214reverse complement
CNT30103186Oryza punctataOryza rufipogon60.267.2484.78138forward
CNT30578297Oryza punctataOryza barthii86.926.0886.93199forward

Expression of CNT30604071

Peptides detected in this lncRNA

>peptide 1 (53 aa)
HLLLLQLILLLDFCSILLELLLVASPTTLTSQSLTLTSRGCIHEAATAVMVHC*

Sequence

>CNT30604071
CCCACTTGCTCCTTCTTCAGTTGATCCTCTTGCTTGATTTCTGCTCCATCTTGCTTGAGCTGCTACTGGTTGCTTCTCCTACTACTCTGACCTCTCAGTC
GCTCACCCTAACCTCCCGTGGCTGCATACACGAGGCTGCAACAGCAGTGATGGTGCATTGTTGAGGTGTTGAACTACTGATCTGATAGCTGTGATTATTT
CTCTATGGCTTGAGCTGGATCCCCCGCCG