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Detailed information on CNT30604059


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101143Oryza punctataOryza rufipogon29.7526.5693.37166forward

Expression of CNT30604059

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MPTALGRSFAPLPSSLSNTSTTIHSLSIKFCVFYVVYIVPIQLYETK*

>peptide 2 (41 aa)
MRGIGKTARHISTPKFRGEAVLGFPPCSHANRSWTFVCSSS*

>peptide 3 (30 aa)
MFPCQPLLDVRLLLFLAHFQIHLLPSIHYR*

Sequence

>CNT30604059
GGGGTGGGGGATACGGTTGGAGGCGCTTCAGCTACGGCCGGCCGAGGACCTGAGGCGAATTGGTTCCGGATGGGATTCTGATGAATAAACATTGTTGATG
TCAATGACCAGACGATTGGATCAGCTTGGCTGAACACGTACTATTCTCTCACTGCGAGCCCAAGGAGAGTTACCAAAACAGAGCACGTAGGTGTTATGAA
GAACACAACTAAATTGTACAAGCACGGAGGAGGAGGAAGGAGCACCGAAGAACAATAGGCATGAGAGGCATCGGGAAAACAGCGAGACACATCTCAACCC
CTAAATTTAGAGGAGAGGCTGTGTTGGGCTTTCCTCCATGTTCCCATGCCAACCGCTCTTGGACGTTCGTTTGCTCCTCTTCCTAGCTCACTTTCAAATA
CATCTACTACCATCCATTCATTATCGATAAAATTTTGTGTATTCTATGTTGTTTATATTGTACCAATACAATTGTATGAGACAAAATGAAGATGAATGAA
ATTCTAACAATGATAGGAATGGGAGGTATCGAGAAAACGTAGGAACAAAAATCTCCAC