Detailed information on CNT30604027


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30249555Oryza punctataAvena sativa23.8234.8286.0586reverse complement
CNT30116506Oryza punctataOryza nivara26.596.8390.6296reverse complement

Expression of CNT30604027

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MGAASRRLAVLELVSIVAVLLISSPAAAAPPELSVDFHAASCPQLEAIVRSSVQAALQQEIALAAGLLRIFFHDCFPQ

Sequence

>CNT30604027
ATCATGTGGGGTACATAGATAGATGGTCGCTGGCTTATAAATAATAGCCAGACAGTATTGGACGTGAGGAAGCCACAAGCACAGCCGTTAAGCTGCTTTC
CAGTCCATTGCAGAGTGAGTGCGGAGATGGGTGCAGCGAGCAGGAGACTGGCCGTCCTGGAGCTCGTCTCCATCGTCGCCGTCCTCCTCATCTCCTCACC
AGCTGCAGCTGCACCGCCTGAGCTGTCCGTGGATTTCCACGCGGCGTCGTGCCCGCAGCTGGAGGCCATCGTGCGCTCCTCCGTTCAGGCGGCGCTCCAG
CAGGAGATCGCCCTCGCCGCCGGTCTCCTCCGCATCTTCTTTCACGACTGCTTCCCGCAGG