Detailed information on CNT30604016


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005729, E-value = 1e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694499Oryza punctataOryza sativa98.4169.0892.34248forward
CNT3066878Oryza punctataLeersia perrieri44.8410.1790.27113forward
CNT30108911Oryza punctataOryza longistaminata95.2410.9987.92240forward
CNT30117788Oryza punctataOryza nivara86.1153.5892.63217forward

Expression of CNT30604016

Peptides detected in this lncRNA

>peptide 1 (37 aa)
ACNFIWDPGPCGAHVGCAIIRWSTTLGFPWSSSHLFK*

Sequence

>CNT30604016
GGGCTTGTAACTTCATCTGGGACCCCGGCCCATGTGGGGCCCATGTAGGGTGCGCCATAATTAGGTGGAGCACGACCCTAGGGTTCCCTTGGTCGTCCTC
CCACCTCTTTAAATAGCTAGGTACCCCTTTAGGGTTTCTTGGGGTTTTGTTAGATTAAAGTTTAGCCATTGCTACTTGCTTGCAGCGCGCGTGTCGGCTA
GACCGTCCGTCTGCTTGTTCTTCGGAACCCCAACTTATCATTTGTATTCAAT