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Detailed information on CNT30604011

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30575955	Oryza punctata	Oryza barthii	33.22	38.64	84.8	204	forward

Expression of CNT30604011

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVGACISLFVTKKALLGHALLICMDMFRIL*

>peptide 2 (33 aa)
HTCFGCHHSAARLAQFRASGPGHRASAVNEFLS*

>peptide 3 (54 aa)
HLFWLSPFSSKISSVQGFRPRTQSICCQRVLELIIPRPVSTEMQVFSKRTIRHV*

Sequence

>CNT30604011
CACACCTGTTTTGGTTGTCACCATTCAGCAGCAAGATTAGCTCAGTTCAGGGCTTCAGGCCCCGGACACAGAGCATCTGCTGTCAACGAGTTCTTGAGCT
AATAATCCCGCGGCCGGTTTCAACGGAGATGCAGGTTTTCAGCAAGAGAACTATCAGACATGTATAAGATGACAACGATATGGAGTGGCTTTTCTAATCT
AAAGATATCAGGGGAATGAATAAGGAAGTTTCAAAAGATTGCATATACCGAATTACATCCCATTCATATGGTAGGTGCCTGTATTAGTTTATTTGTAACG
AAAAAGGCCCTTCTGGGCCATGCATTACTCATATGTATGGACATGTTCCGTATCTTGTAACCTGTTCTTGTTGTTTGTCTGATCTGCACTGGTAGCATCC
AGCCTGACGACGCCCAGGGAACTCTGTTGACAGATGCCATAGATCCACCTGCAGCTACCAGCTACCCTGAATGATTTATTATCTGTGCAACTCTTCTGCT
CCATTTACCTCTACGTAACACTTACTTCGAATAACTGTAATTTATGCAGCTGTAGTGTAACCGTTCCATTTACCTATACGAAGTTTAGACTTTATACATA
TAGGTGCAATACTA