Detailed information on CNT30604003


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370146Oryza punctataOryza glumipatula64.950.7597.78135forward
CNT30101396Oryza punctataOryza rufipogon81.7356.4897.65170forward

Expression of CNT30604003

Peptides detected in this lncRNA

>peptide 1 (68 aa)
GRVVGDDAGGGEELLGVPPVGEPWHVVGDPDRPFVLRELLVPGVPRHVRRQAGPPVVAHGTKNGHPGEP

>peptide 2 (45 aa)
MACGGRPRPPICPAGAAGSRRATTRSTASRTTSSCPRDQEWPPRRA

>peptide 3 (31 aa)
MWWETQTAHLSCGSCWFQACHDTFDGKPDHQ*

Sequence

>CNT30604003
GGGCCGGGTTGTAGGCGATGACGCTGGAGGCGGGGAAGAGCTTCTGGGAGTTCCACCAGTAGGTGAGCCATGGCATGTGGTGGGAGACCCAGACCGCCCA
TTTGTCCTGCGGGAGCTGCTGGTTCCAGGCGTGCCACGACACGTTCGACGGCAAGCCGGACCACCAGTAGTTGCCCACGGGACCAAGAATGGCCACCCCG
GCGAGCCT