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Detailed information on CNT30603969


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30587177Oryza punctataMusa acuminata5.2221.0486.9669forward
CNT30370044Oryza punctataOryza glumipatula42.2537.1788.91559forward
CNT30108723Oryza punctataOryza longistaminata25.2532.8794.91334forward
CNT30576138Oryza punctataOryza barthii27.8929.5490.51369forward

Expression of CNT30603969

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIFLQVVQLLSQACCLPLPELLDMKTESINAVSR*

>peptide 2 (67 aa)
MRVVMGWFSSEANFFNEIQKHFEGMRAVRLTICVLSVHFHRLLSLGIEPLLTVYQQVLYTNYLQGCLV

Sequence

>CNT30603969
GTACGGAATGAATATCTACACTTAATTTTAGCTGATCAACAGACAGCTGTTAATTGATAATAAAAATAATTTGTACCTTTTTAGTTTAGTTATTGTAAAT
TAGGCTTGAAGGACAGAATGGAGTGTTTGAACAATAATTTACCAGGCAGAATGCACAGGTGAAGAAAATGTGATGTTCACTCTCCTTTGTAAATTAGGTC
TGTCCGCCTTTGATATGTGCTCAATTCTGTTTTCCTTTTAGAGGTAACCGGAATTGCGTAAAAATATGGCTGAAGGTATATATTTCGTACTTTTAAATGA
TATAGGTAATTCACGTGCCTTGTACATTTCTTTTGTTTGTGAAGGTTAAACAATGGATTATCTATTGGAAATCTGGAATCAGCATATGTCACTTTCATAG
TATTTTTTTTATTTCTTTTTGCTAAGTATCATATACCCAAGCACTCTTTTTGTGATCTGGTACTAGTTTATATTTACTATACAATTAGGTGCTGGAAGTA
TTATTGTCGCTAGCAGTGACCCCACAAAAAAAAGTTCATCATCAAGAGTTGTGAACAGTGACATGATGCATGTATCTCATAGATATATGGTTGTTTATTT
TTCTTCTATCTTGAGGAATTTTCTGATGGAACATTGAAAAACTTGCAGGGTTTTCTGGCCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTC
AAGCTTGCTGCCTCCCTTTGCCAGAACTATTGGATATGAAAACAGAGTCAATAAATGCCGTATCCAGATAAGACGATGAGCTACCAGCTTTATTGAATTT
GGTACTCCATTATCGGTCCTTTTTGTTTTGCGGGGTGTTACTCCCGTATTGTAAAAAGCTTATTTGTCTAAGCAAAATGCTCTCAAGTTCCACCAAGCTA
GATTAACCATAAAGTATCTGCAGAGTGCACAAGTCAGGTAAGTGATGATAATCATCCTGGTACAAGCTTTTGTATTGCGGTGAAAGATAAGCAGTTAGTC
TGAAATTTGTGCAGATCTGTCAGCTGTTACCGAAGCAAAAGGTTCAATGTGAACAGAAAGGATACAGTACTGATCCTTTTTAGAGGATTTAACACAGATT
GACAGCAAGGGTGCTCTGTATGCGAGTCGTGATGGGATGGTTCTCTTCAGAAGCAAATTTTTTTAACGAAATTCAGAAGCATTTCGAAGGCATGAGGGCT
GTTCGGTTGACAATTTGTGTATTATCTGTACATTTCCACCGTTTACTCAGCTTAGGAATTGAACCATTGTTAACTGTGTACCAGCAGGTTCTGTATACGA
ATTATCTTCAAGGGTGTTTAGTG