Detailed information on CNT30603966


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555586Oryza punctataOryza glaberrima56.3129.1597.7174forward
CNT30104268Oryza punctataOryza rufipogon57.9313.6984.36179forward
CNT30576066Oryza punctataOryza barthii40.453.1684.8125forward

Expression of CNT30603966

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TTFSWGFLTCLQAVLDELLIMKCQVIFLNLIRQRNYIR*

Sequence

>CNT30603966
ACAACATTCAGTTGGGGATTTTTGACGTGTCTTCAGGCTGTTCTCGATGAGCTGTTAATTATGAAGTGTCAAGTGATTTTCTTGAACTTGATCAGACAAA
GAAACTATATTAGGTGAATATTCATGACCTGTTAGTCTGAAGCGGAAGTAGAATCAGATTTAGCAAATGCAGATGTAGAACTTTCCAAGTAGATCGGTCG
GGCACAATCTTACTGTGCCATTGCCAGTCATCCATTCATGCACAGAGCAAATTTAACTCAAGATTGTGAGATGATGCATATACAACTGAATAAAGATACA
ACCTTTTCT