Detailed information on CNT30603707


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 3e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677101Oryza punctataSetaria viridis98.8639.8489.63347reverse complement
CNT30562726Oryza punctataActinidia chinensis43.8738.7985.06154reverse complement

Expression of CNT30603707

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MASPRGSYFSAAVLGTRTKARGIFSTPSYPEKVGSPCVLKPITIFRLT*

>peptide 2 (66 aa)
GTPLLKVIRVFPESMAWVTYFSVVAPGMSLVEKQWLVHGAHTSALQCLVLGPKLEAFSLPLLTLKK*

Sequence

>CNT30603707
GGTACCCCTTTGTTGAAGGTCATTCGAGTTTTTCCTGAGAGTATGGCATGGGTTACATACTTTAGCGTCGTAGCGCCAGGTATGAGCCTCGTGGAGAAGC
AATGGCTAGTCCACGGGGCTCATACTTCAGCGCTGCAGTGCTTGGTACTCGGACCAAAGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTGAAAAAGTA
GGTTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAGTACAGGAATATTGACCTGT
TGTCCATTGGCTATGCCTTTCGACCTGTTCTTACGCTCCGACTCACCTTCC