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Detailed information on CNT30603705


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30368632Oryza punctataSorghum bicolor9.9425.6383.792forward
CNT30595791Oryza punctataOryza meridionalis51.5167.6696.86477forward
CNT30105771Oryza punctataOryza longistaminata44.4982.2492.48412forward
CNT30575459Oryza punctataOryza barthii70.1993.9393.85650forward

Expression of CNT30603705

Peptides detected in this lncRNA

>peptide 1 (86 aa)
QSKAMTTDLATREYTTRHHRSNKNMRQVYIVTEATEFPTCNKGLQLNSRLAAPRKKQPAGQPGDQITEYTMTLARRRNTNDLTTTD*

>peptide 2 (31 aa)
MVWACKNLGSWKEKKSSSGGRGRKRRKKKRS*

Sequence

>CNT30603705
CAATCAAAAGCCATGACAACTGATTTGGCAACTCGAGAGTACACAACTAGACATCATAGATCAAACAAGAACATGAGACAGGTATATATAGTTACAGAAG
CTACTGAATTTCCAACATGTAACAAGGGGTTACAGCTTAATTCTCGACTGGCCGCGCCGCGAAAAAAACAACCGGCAGGTCAACCAGGAGATCAGATCAC
TGAGTACACCATGACACTTGCACGACGACGTAATACCAACGACCTTACTACTACTGACTAGTTACTGCTACTCGCAGAAGCCATGGCCGACGTCTAAAAT
GCCACCGAGCCATGGAAGCAACGGAATTCAGAGAAGATTACACAGCTAGTTGAGTTGAGTGACTCTAGCTTGACGAAGACTACTACTAGTACTAGTAGAC
TAGTAGCTGCTTCTGCTTGTTTATGAGAGGATTGAGTCCCAGTCGATCTCCCAAGATGGGTACTTGCGCAGGTGGAATGTCTCCGACTCGTCCCATGGCG
CCTCCGTGAAGTCCAGCTTCTCCATCTCCGGGACCGGAGGCGACAGCGGCGTGGGCGGCGGGGGGGAGCCGGCGGACACCGAGTCCTCCCCCTCCGTCGA
CGCCGAGCACTTGGGGGATTCCGGCTCAGCCGCGGAGGCCGCTGACTCGGCGGGGGTGTTCTTGGACGAGCTCGTCGTGGCGAGTGACTGGCAGATGGCG
GTGGTGGCGGCGGCGGTTGTGATAGAGGAGGTGGGGTAAGATGGTGTGGGCATGTAAGAATCTTGGCTCATGGAAGGAGAAGAAGAGTAGTAGTGGTGGT
AGGGGGAGGAAGCGGAGGAAGAAGAAGCGCTCCTAATAAAAGGTTCGAGCGCTTTCATTAGCTCCTGATCCGAGGATGCGATCTGGTGTGTGCTAGTGTT
ATACTTGTACATGTCTATTGCTGCGG