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Detailed information on CNT30603702


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691387Oryza punctataOryza sativa38.9410.7192.93509forward
CNT30552698Oryza punctataOryza glaberrima37.4133.1388.96489forward
CNT30107393Oryza punctataOryza longistaminata74.970.5890.6979forward

Expression of CNT30603702

Peptides detected in this lncRNA

>peptide 1 (91 aa)
DTSSPSPPPPRATCVAALLRFHGHMPRTARHGHRLLARALSLARARAVLPPRPPPRSASPPFEPLSLSLSLSLSCARRDGRSRTDLVNSPP*

>peptide 2 (87 aa)
QTLLRLPLLRRERHVSRLCFASTATCRARRATGTAYSLALSLSRARAPSSRRVRRPDPPLPLLNLSLSLSLSLSPVRGATGAAAPIS*

>peptide 3 (62 aa)
RHFFAFPSSAASDMCRGFASLPRPHAAHGAPRAPPTRSRSLSRARARRPPAASAAQIRLSPF*

>peptide 4 (46 aa)
MPSPHSTVRACGAPWFLRVMQGDGDKLVVATAHLARKSLGFFRPYR*

>peptide 5 (36 aa)
MVRLNLLINNNIFTSVDASATRQCQMNSSTYEVLVR*

Sequence

>CNT30603702
CAGACACTTCTTCGCCTTCCCCTCCTCCGCCGCGAGCGACATGTGTCGCGGCTTTGCTTCGCTTCCACGGCCACATGCCGCGCACGGCGCGCCACGGGCA
CCGCCTACTCGCTCGCGCTCTCTCTCTCGCGCGCGCGCGCGCCGTCCTCCCGCCGCGTCCGCCGCCCAGATCCGCCTCTCCCCCTTTTGAACCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCCTGTGCGAGGCGCGACGGGCGCAGCCGCACCGATCTCGTGAATTCCCCTCCCTGACACTCTCCCAGTCCCCCGCCCA
AATCGCAATGCCTTCTCCGCACTCGACGGTCCGGGCGTGCGGCGCGCCGTGGTTTCTCAGAGTTATGCAAGGGGATGGTGACAAGCTTGTGGTAGCAACT
GCACATCTTGCCAGAAAATCTTTAGGGTTTTTCAGACCATACCGGTGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCC
AAAACTATCAAGTGAGAAAGCAGAGTAGAGTTATTCAATTTACGGACACACCAGAAAAAATTAAAGTAATAAACATGTCTGACCAACAAACACGATGATT
AATAACAGAACTATTGTGGCATGAGATTAATATATTGAAGCATTATGCTTACAACAGTTATAAAATGAAAACTAAATGTAGGCAGGTACATGTTTTGACA
ATGTTGACGTTATCTTAATGGTTCGGCTAAATCTTTTGATTAACAACAATATATTTACTTCCGTGGATGCTAGTGCCACCAGGCAATGTCAAATGAACTC
ATCAACATATGAAGTACTAGTAAGGTGAGTAAAGTCTGGTAAGGAAGTCGAACGGCTAATATGTATGTAAATTATTCCTAGAGTTCTTAGGCTGCACTGG
TAAACTGTTTAGTCCATCCTGATCATCTATTGCTGTCAACTCTGATCAGATTACGTCGTCTCCACATTGTGTATTGGCTTCCACTGCTGAATATTTCTTT
TATTGCCCATGACATGCTTGCTTGGAAGGGCAGTTTTGAGTTGATCATGAGGTTTGCAGGAATTTCTCCAGGAATGCCCAGTGAGTGATCCTGTAATTTT
TGGAGTTGATTGTTCATCAGAATAGCACTACAATTTTCCTGTCATCTGTGCTTTGGTAGCGGAACGTCCTTTGTCCGATGCTACTCAACAGGAGTGGCAA
AGACACATCTTTGTACTTGTGTAAATCAAATAAGACTGAATAATATATGTTTACTTTTGGAAGGAAAAAGATGTATGACTGTTCTCAAGCAAATGAAACA
TTCCAGC