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Detailed information on CNT30603680


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 6e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Oryza punctataOryza sativa12.1910098.96481forward
CNT30671914Oryza punctataSetaria viridis37.889.7298.061492forward
CNT30524649Oryza punctataSetaria italica53.4864.0598.962111forward
CNT30641383Oryza punctataNymphaea colorata35.8545.2994.561415forward
CNT30550219Oryza punctataIpomoea triloba35.7232.4798.091410forward
CNT30702366Oryza punctataQuercus lobata25.2310098.49996reverse complement
CNT30378673Oryza punctataArabidopsis thaliana18.2457.7496.53720reverse complement
CNT30619000Oryza punctataSesamum indicum25.0832.4194.44990forward
CNT30283003Oryza punctataChenopodium quinoa22.7894.1497.55899reverse complement
CNT30730481Oryza punctataCorchorus capsularis30.0296.3493.421185reverse complement
CNT30632346Oryza punctataVigna unguiculata34.6148.8497.81366forward
CNT30490123Oryza punctataOlea europaea13.3330.2197.15526forward
CNT30505560Oryza punctataNicotiana attenuata35.2462.9197.411391reverse complement
CNT30157603Oryza punctataPistacia vera18.8878.0990.6745forward
CNT30185187Oryza punctataSecale cereale49.3555.0798.561948forward
CNT30294268Oryza punctataTriticum aestivum51.6667.3498.382039forward
CNT30223648Oryza punctataHordeum vulgare51.5685.6895.232035forward
CNT30387090Oryza punctataTriticum turgidum51.6672.4698.682039forward
CNT30569655Oryza punctataActinidia chinensis35.6239.4897.231406forward
CNT30543268Oryza punctataBrassica napus30.151.7695.451188forward
CNT30555751Oryza punctataOryza glaberrima1160.8799.31434reverse complement
CNT30147396Oryza punctataMedicago truncatula34.9946.4297.541381forward
CNT30435868Oryza punctataAegilops tauschii35.3210099.281394forward
CNT30242786Oryza punctataAvena sativa21.97100.1299.54867forward
CNT30670388Oryza punctataTriticum dicoccoides47.1566.3798.551861forward
CNT30140120Oryza punctataLolium perenne51.5861.3199.712036forward
CNT3017956Oryza punctataZea mays48.2654.0197.81905forward
CNT30605068Oryza punctataGossypium raimondii29.3475.7996.981158reverse complement
CNT30216563Oryza punctataKalanchoe fedtschenkoi34.8935.4197.971377forward
CNT30655407Oryza punctataRosa chinensis35.4441.8597.51399forward
CNT30207637Oryza punctataHelianthus annuus27.0354.5594.281067forward
CNT30628241Oryza punctataDaucus carota33.1448.4498.851308reverse complement
CNT30688989Oryza punctataTriticum urartu25.7251.699.611015forward
CNT30721631Oryza punctataTriticum spelta47.5854.0798.881878forward
CNT30346087Oryza punctataEragrostis tef21.4882.0199.88848forward
CNT30360996Oryza punctataLactuca sativa27.0173.0695.031066forward
CNT30429739Oryza punctataPapaver somniferum33.0140.594.091303forward
CNT30571858Oryza punctataVitis vinifera36.4641.5297.981439reverse complement
CNT3056076Oryza punctataAmborella trichopoda29.745192.931174forward
CNT30108930Oryza punctataOryza longistaminata4575.91001776forward
CNT3038324Oryza punctataCucumis melo33.3269.7297.571315reverse complement
CNT30103741Oryza punctataOryza rufipogon13.3310097.15526reverse complement
CNT30499372Oryza punctataDigitaria exilis86.22100.1299.353403forward
CNT30557400Oryza punctataPanicum hallii17.4650.2298.11689forward

Expression of CNT30603680

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMSQGSSDSPKRRDLESCFFKCQ*

>peptide 2 (54 aa)
MHWMDARALRRKDAFRGERPWGERASVIHGSPIGKPYPSSVASLRSLDFSNLAN*

>peptide 3 (98 aa)
MSAKAVALPYTRIRFLAPSRVSTITRSRFLAGADTDFSLKAKTQKWANTRPSGRTCRLRLRAPADTFRSTFTCEPKSSCRTPSFLISVLAFFIFRRGL*

>peptide 4 (33 aa)
MNRLFVLFISRFFGKIFFHFPSVLELPFCFFLLL

>peptide 5 (45 aa)
MSNEKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 6 (45 aa)
MMEKPASSKRRLCCRSAPYGVVQSQQPFWGASIGNTGLMTGWGAQ*

>peptide 7 (49 aa)
MFDAIENHALDGCPGIEKEGRFQRRKAMGRESVCDPWISDRETVSKLRG*

>peptide 8 (32 aa)
MKVVRELGLERRETVRFLSTVGVKGRTARSQP*

>peptide 9 (33 aa)
MMSMARGRALNGLGWPPFRFTNPRETPNTGRHP*

>peptide 10 (30 aa)
RMRFSNKALIPCSFALVAQSVACFSSVLEK*

Sequence

>CNT30603680
CGTATGCGCTTTAGCAACAAAGCGCTCATCCCTTGTTCTTTCGCGCTAGTTGCTCAATCCGTTGCTTGCTTCTCTTCTGTCTTGGAAAAGTGAGGATTTC
CTATCTGATCCAAGGGAAGGAAGAGAGGTGGAAAGTGTTGCTGTGTCAAATCGAGATTGTGTGGGTGTTCAGTCTACCGCTCATGTTCGACGCTATCGAA
AATCATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGAGAGAGCGTCTGTGATCCATGGATCTCCG
ATCGGGAAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGAAAATCA
ACCGAGACCCCGTTAGTAGCGGCGAGCGAGAGCGGAACAAGGGTTTTCATCAAAAGAAATCCGAAGCGGTTTCATTCGATTTGTTGTGGATTGGATGATG
GAAAAACCAGCAAGCAGCAAGCGTAGGCTGTGTTGCCGTAGCGCGCCCTACGGAGTTGTACAAAGTCAGCAACCGTTTTGGGGCGCAAGCATAGGCAACA
CAGGACTGATGACGGGGTGGGGCGCGCAGTGAACTGGTTTTCTAAAAAGATTGGAAGATCCGGCCAAAGAAGGTGATAGCCCTGTTCATTCGTTCCCATG
GTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATGATGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCTCAATGACCG
ATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCCAATCGGGGAGTGCAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGG
AGCGCGGGCGCACTCACTCTAACGGCGTACCTTTCGCATGATGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGA
GGTGGAAGATTTACGTTCTTCCTATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCAC
GTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTA
TGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCCATTTCGCTTTACCAACCCCAGGGAAACTCCGAATACAGGCCGTCATCCTTA
GTACAGACAGACTGATTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAG
TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTCT
CAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGCGGGACGTTCTGTCAATCGGGGAAGGTTTTTGGTGAC
AAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCTGTGAAAAACACGATCGCCTGCCAGTGGAAGGCTTTCTGCGTTCAGTC
AATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACTGAACCATGC
CTGGATCGTCGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCGCTCTCCTTTCCTTAATATTCACCGTCGAGTCATCAAAGCCGTC
AACTAATTCAGAGGGGCTCGGCTGGCCCGGTCGCCCTACGCTACTGGCGCTTCCAAAGGCGAAGCTCTCGTCTTTGGCGACCAGCAAACTCTGGGCTAAA
ACCTGTAGTTTTGAAGCAAGGGATGAGCGCGAAAGCCGTTGCGCTTCCGTACACGCGCATACGTTTTCTTGCTCCGTCGCGCGTTAGTACAATAACGCGC
AGCCGTTTTCTTGCTGGGGCGGACACGGATTTCTCTCTAAAGGCGAAGACTCAGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGCTCCGGC
TCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCACGTGTGAACCGAAGTCGTCTTGCCGAACTCCTTCCTTTCTCATTTCAGTCCTCGCCTTTTTCAT
CTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCG
ACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAGCTGACCGTACCCCAAACCGACACAG
GTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCT
TTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGC
CCGGTGCTGGAAGGTCGGAAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCC
TTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTA
CCAACGGCTAGACGGTAAGACCCCGTGCACCTTGACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAAC
GACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGG
GCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACC
GACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGC
TGATGACTCCCAAGAGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTC
GCCGATGAAAGTGGTACGTGAGTTGGGTTTAGAACGTCGTGAGACAGTTCGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAACCC
TAGTACGAGAGGACTGGGTTGGGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCG
CGGGAAATCCTTCTCTATACAAGTTCTCGTACGAGGTTTTTGAACAGAACTTCGATAGGCGAGAGGTGTAAGCACCGCGAGGTGTGAAGCGATCTCGTAC
TAAACGAATGGAACTTTCCAACCTTCGAGAAAAGGTCCCATCCTTCAATATCATGATTGGGTCAACCAGGCCAGATCATAAGTGAAATAGTTTGATCTGG
TCGACCAGGTCAGGCCCGATCAAGCGAATTTGTAAAGTTGTAAGATGAATCGCCTTTTTGTACTATTTATTTCACGGTTTTTCGGGAAAATCTTTTTTCA
TTTTCCCAGCGTCCTAGAATTGCCTTTCTGTTTTTTCCTTCTCCTTT