Detailed information on CNT30603606


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575457Oryza punctataOryza barthii52.1325.3290.82196forward

Expression of CNT30603606

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSWASESCQRSERAAPRRGAETSRSRAGQIRFAWGIHLVGAGATESNC*

>peptide 2 (39 aa)
LRLPPPTAASPSAVAVAQGCPHHGSPLRQTRRHLLANHE*

>peptide 3 (50 aa)
FVSRRRRLLHRRPSPLLRGVLTMDLLSARRGATFSPTMSDELGKRELPAK*

>peptide 4 (37 aa)
SSPAADGCFTVGRRRCSGVSSPWISSPPDAAPPSRQP*

Sequence

>CNT30603606
CTTCGTCTCCCGCCGCCGACGGCTGCTTCACCGTCGGCCGTCGCCGTTGCTCAGGGGTGTCCTCACCATGGATCTCCTCTCCGCCAGACGCGGCGCCACC
TTCTCGCCAACCATGAGTGATGAGTTGGGCAAGCGAGAGCTGCCAGCGAAGTGAGAGGGCGGCGCCGCGGCGAGGAGCGGAAACCTCGAGATCACGAGCT
GGTCAAATCAGGTTTGCCTGGGGTATTCACCTTGTTGGGGCTGGAGCCACTGAGTCGAACTGCTGAATTGAAAACCACTCAAGATCAACACACAGTTAAG
ATGGTTATAGTAATTACAAAGTCGCGGCTGTTGCTTGCTTGTTTCAGTTCTATGACCCATTGCATATTTACAAGCC