Detailed information on CNT30603588


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690441Oryza punctataOryza sativa36.7216.8184.91159forward
CNT3099806Oryza punctataOryza rufipogon18.7121.9591.3681forward

Expression of CNT30603588

Peptides detected in this lncRNA

>peptide 1 (49 aa)
IKPLIHCWARRRVFPDPERNITGLTAFTNSGMPLPPRLVPPKTTAANNS*

Sequence

>CNT30603588
ATCAAACCATTGATCCATTGCTGGGCTCGACGCAGGGTTTTTCCTGACCCTGAACGGAATATCACCGGCCTCACTGCTTTTACCAATTCTGGAATGCCGC
TTCCACCCCGTCTTGTTCCTCCAAAGACAACAGCAGCCAACAACTCCTAAAACGCCACAAATAGTTGTGACCACGGCGATCACCACGTTCTTGATTAGGC
GCCGGCGTCTTGCTGAAATCAAAACAAAGTTGGGTGATGATGGACATTTGCTCGCGCAAGTAGATGGACTGCACTGCGGCCAGTCCAGTTGATATGGTAT
GAAAAAATTATTGGCTCTTGCGTATCAAGATTCAAGCAACGACTGATTGCTAGTTGACCCGTTTACCCATTCTAATTTGCTAACTGGGCAACCATCTATT
TTTCTAAGAAACCTACCTACCATACTTACTCAC