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Detailed information on CNT30603506


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZI2|UXS2_ARATH, E-value = 2e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Oryza punctataSetaria italica66.7344.6786.27335forward
CNT30703138Oryza punctataQuercus lobata70.7267.7581.69355forward
CNT30499549Oryza punctataCoffea canephora76.6978.5778.18385forward
CNT3068683Oryza punctataQuercus suber70.7272.1582.25355forward
CNT30454417Oryza punctataSaccharum spontaneum76.148.7993.19382forward
CNT3066796Oryza punctataLeersia perrieri75.196.9283.02377forward
CNT30653881Oryza punctataRosa chinensis73.3134.4681.52368forward
CNT30718631Oryza punctataMalus domestica golden76.6967.0781.3385forward
CNT30339698Oryza punctataEragrostis tef77.4931.589.72389forward
CNT30595456Oryza punctataOryza meridionalis77.4968.2583.55389forward
CNT30105598Oryza punctataOryza longistaminata77.4956.4696.92389forward
CNT30102778Oryza punctataOryza rufipogon14.1428.0691.5571forward
CNT30580197Oryza punctataEchinochloa crusgalli77.4947.2192.29389forward

Expression of CNT30603506

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MGSTTSWRITSKRGFARWCATLSLRPVKKLSTTITLSPRSTSRSTRWLPTNPESGLEGLGEYSPPSEAEPGAAPPRYVSSDAISAGERSQ

Sequence

>CNT30603506
ACCAATGGGGTTAACATTGCCCCAGTAAGTCTCCACCTGAGGGTGCTGGAGGGGATCACCATAGACCTCACTGGTGCTGGTTAGGAGAAACCTTGCCCCA
ATCCTCTTGGCCAATCCAAGCATGTTCAGTGTTCCAACAACATTGGATATGATGGTCTTGATGGGGTTGTACTTGTAGTGCACGGGGCTGGCGGGGCAGG
CGAGGTGGTAGATCTGGTCGACCTCGAGCAGGATGGGCTCGACGACGTCGTGGCGGATCACCTCGAAGCGCGGGTTCGCGAGGTGGTGCGCCACGTTGTC
CTTGCGCCCCGTGAAGAAGTTGTCGACGACGATCACGCTGTCGCCGCGCTCCACCAGCCGGTCCACCAGGTGGCTCCCGACGAACCCGGAGAGCGGCTTG
GAGGGCTTGGGGGAGTACTCCCCGCCGTCGGAGGCGGAGCCCGGGGCCGCGCCGCCGCGGTACGTGAGCTCCGACGCCATCTCCGCCGGCGAAAGGTCTC
AG