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Detailed information on CNT30603505


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690702Oryza punctataOryza sativa99.1698.7594.09237forward
CNT30552070Oryza punctataOryza glaberrima98.7498.7493.64236forward
CNT30438108Oryza punctataAegilops tauschii20.082091.6748forward
CNT3066610Oryza punctataLeersia perrieri100.8499.5993.36241forward
CNT30622805Oryza punctataDaucus carota20.9219.699050forward
CNT30595512Oryza punctataOryza meridionalis98.7498.7493.22236forward
CNT30369412Oryza punctataOryza glumipatula10098.7693.31239forward
CNT30107154Oryza punctataOryza longistaminata98.7498.7495.34236forward
CNT3099525Oryza punctataOryza rufipogon99.1698.7593.67237forward
CNT30574848Oryza punctataOryza barthii98.7498.7493.64236forward
CNT30115824Oryza punctataOryza nivara98.7498.7493.64236forward
CNT30551841Oryza punctataOryza brachyantha100.4296.7783.33240forward

Expression of CNT30603505

Peptides detected in this lncRNA

>peptide 1 (51 aa)
PAHDEVSGFFVALESPRALNRRDAAAETRKVSALSPSSSRGGRDVCGALWA*

>peptide 2 (42 aa)
MRPRRRGKSQRSRPPLREGAETCVEPFGREPGSKWPITQLFT*

Sequence

>CNT30603505
CCAGCACATGACGAAGTGAGCGGGTTCTTCGTAGCCCTGGAAAGTCCCCGGGCCCTCAACCGCAGAGATGCGGCCGCGGAGACGCGGAAAGTCTCAGCGC
TCTCGCCCTCCTCTTCGCGAGGGGGCAGAGACGTGTGTGGAGCCCTTTGGGCGTGAGCCGGGATCAAAATGGCCAATTACACAGTTATTCACTTGATTCA
TCATTGGATTAACAGAACGGGGCTTACGATCGTGTGCAG