Detailed information on CNT30603466


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690060Oryza punctataOryza sativa52.2420.0497.98198forward
CNT30552389Oryza punctataOryza glaberrima81.5393.9296.12309forward
CNT30369298Oryza punctataOryza glumipatula88.9274.7295.85337forward
CNT30574974Oryza punctataOryza barthii81.7973.8196.45310forward
CNT30115689Oryza punctataOryza nivara45.6553.0795.38173forward

Expression of CNT30603466

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFLFRHFPTPKVNGVKILGGLHGGRALLPTPCSSHQLR

Sequence

>CNT30603466
TTCAGAGGAACCATAATTGATGCCTGGTTCATCAGACTGATATGCCAGCAAGAATAGTGCAAGGAACCAGTGCAATCTGATCTGAAACTCACATGATAAT
AACTCACGACAAAAGGAGCTAAACATTATTGGCATGTAGTATGTTCAGTGGTGTGCATTATTAGCATTGCTCAAGCTGCAGGTAGCTTCGGGGAAGTGAA
GGGGAGGAAAAAGAGTAGCTGCTCCAGCACAAAATTACTAGCATTACATAAGCACAGAAAAAGGTATGTTCCTCTTCAGACATTTTCCCACGCCGAAGGT
GAATGGGGTGAAGATCTTAGGCGGACTTCACGGTGGCAGAGCTTTGCTGCCAACTCCTTGCAGTTCGCACCAGTTACGG