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Detailed information on CNT30603430


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690003Oryza punctataOryza sativa22.4920.9794.64112forward
CNT3099597Oryza punctataOryza rufipogon31.1225.8389.68155forward
CNT30115659Oryza punctataOryza nivara21.8928.5396.33109forward

Expression of CNT30603430

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MNTDQTLASTSSGRSGAKWDTNNNNNNEQISLASDGGNNNNGDK*

>peptide 2 (60 aa)
MAATARTARMARAFDPATAAIASSRWLVGGGGGGGEKVLEGGVIMERERERGCFASARVEV

Sequence

>CNT30603430
CTCGGAATGAAATGGAAGCAGTAATAATATAATCAGTAGCGGAAGAACACTCAGATGAGAGTATCTACAAGCACACCCACACAAAATGAACACAGATCAA
ACACTAGCTAGTACCAGTAGCGGCAGATCTGGGGCAAAATGGGACACGAATAATAATAATAATAACGAACAAATTTCGCTAGCTAGCGATGGCGGTAACA
ATAATAATGGTGATAAATAGTACTAGTAGATCTAGGCGGCGGCGGTAGGCGGAACTCCATCGACGGGACGGGGCTCAGTGGCGGACGGCGGAGAAGAGGA
AGGCGGCGGCGGAGATGGCGGCGACCGCCAGGACGGCGAGGATGGCGAGAGCCTTTGATCCGGCGACGGCGGCCATTGCTTCGAGTCGGTGGTTGGTCGG
CGGCGGTGGCGGCGGCGGAGAGAAGGTTCTAGAAGGCGGGGTAATAATGGAGAGAGAGAGAGAGAGAGGATGTTTTGCTTCTGCTCGTGTGGAGGTGG