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Detailed information on CNT30602702


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30486254Galdieria sulphurariaOlea europaea10.2124.0283.792forward
CNT30710178Galdieria sulphurariaGlycine max11.762583.96106forward
CNT30511260Galdieria sulphurariaSolanum lycopersicum13.2129.5384.03119forward
CNT3011897Galdieria sulphurariaZea mays7.5520.4285.2968forward
CNT30119164Galdieria sulphurariaCitrus clementina17.0933.0582.47154forward
CNT3036150Galdieria sulphurariaCucumis melo16.5444.2181.21149forward
CNT3050576Galdieria sulphurariaCucumis sativus11.8821.2785.98107forward

Expression of CNT30602702

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MQKCLATKHSSKLFTHSLKKFLYRCGISNERCRLFHP*

>peptide 2 (36 aa)
MLLSASVNSISSIPSPVYQCKNALRRNIAVNCSPTL*

Sequence

>CNT30602702
CATGACTCTCCGTCATGCACTCCAAACTCCTCGTGTCAGATATGTTTGAGTAACCAGGATTACCTGCACCTTTAAGCGTGAGACAAAAATAGAAGCTTCC
TCATAGCAGTGTTTTGAAAAAATTAACGAATAGATATTGTGGCTGCAAACAGAGCACAAATGGATTACTACCAACAGGTTTCTTTTATTCAAGCACTTAA
ATGGCTATTTTAAAAGGCCTCCTCTTCTTCGAGGCCCATATCGAAGTCATCTTCAGCAGTGGCTTCTTGATATTGTTGGTATTCTGATACTAAATCATTC
ATGTTACTTTCAGCCTCTGTAAATTCCATTTCATCCATTCCTTCACCAGTATACCAATGCAAAAATGCCTTGCGACGAAACATAGCAGTAAATTGTTCAC
CCACTCTTTGAAAAAGTTCTTGTATAGATGTGGAATTTCCAACGAACGTTGCAGACTTTTTCATCCCTGAGGGAGGAATATCACAGAGTGAGCTTTTAAT
GTTGTTGGGAATCCATTCTACAAAACATGTTTCCACGGAAATATGCAGCTGCAGTTAAATAACGACCATGACGAGGATCACATGCTGCCATCATATTACG
GGAGTCAAACATTTGCTGAGTAAGTTCTGAAACACTGGCAGATCGATATTGCTGTGATCCTGGTGAACTTAAGGGGGCAAATCCAATCATAAAGAAATGA
AGCCTTGGAAATGGAATCAAGTTAGTGGCCAACTTTCGTAAATCTGCATTCAACTGTCCAGGGAAGCGTAAAGTCACTATAGCTAGGGCTGCTAATTTTT
AAGGTACGAAGGCAAATGTCATAGAGTGCTTCATTATCAATGCAGAAAACTTCATCAGCATTTTCCACCAATTGATGCACGGAGAGAGTGCAGTTGTAAG
G