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Detailed information on CNT30600026


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3088158Fraxinus excelsiorVigna radiata25.2411.2386.67105forward

Expression of CNT30600026

Peptides detected in this lncRNA

>peptide 1 (37 aa)
AVRSTTYCPHCTNMGLFSMLCPHSHAPRENFPGGHPS*

>peptide 2 (64 aa)
PLDRRRTVPTVPTWVFSACFVLTRTLPEKTSQGVTHHRISPGQARLTVEFLMMDFRKRRCTLLV*

Sequence

>CNT30600026
GGCCGTTAGATCGACGACGTACTGTCCCCACTGTACCAACATGGGTCTTTTCAGCATGCTTTGTCCTCACTCGCACGCTCCCCGAGAAAACTTCCCAGGG
GGTCACCCATCATAGAATTTCTCCAGGCCAAGCTCGCTTAACTGTGGAGTTTCTAATGATGGACTTCCGGAAAAGAAGGTGCACCTTGTTGGTATGAGTA
GTACATATCAAATCTCTTAAGCTTTCTTGGTCGGGGTATTACAATCACCCACCGTTAAACTCGCGACGTCCTCGTCGCGCTTGATCCATCTGAGGATCTG
TTGCCAGGCGTTGGGATTCTAAAGGTGGCTCCTACGGGTTCAAGAGGTGGCTCCCGTCCTCTGGCGTAGCACTTTGTCCCGCATAGCACTTAGTTCCCGA
TTTCCGGCTGGCAACC