Detailed information on CNT30599980


BLAST search results

BLAST vs Swiss-Prot:
sp|P92996|GL120_ARATH, E-value = 1e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30638659Fraxinus excelsiorCapsicum annuum35.1314.882.6598forward
CNT30567662Fraxinus excelsiorActinidia chinensis30.1127.8184.5284forward
CNT30240637Fraxinus excelsiorAvena sativa31.1822.3782.7687forward
CNT30118053Fraxinus excelsiorOryza nivara30.4716.8783.5385forward

Expression of CNT30599980

Peptides detected in this lncRNA

>peptide 1 (39 aa)
RVRSNESNIESTLQNKKNLSSTGVRVGWVEAIGCIVDTD*

Sequence

>CNT30599980
CAGGGTTCGAAGTAACGAATCCAACATAGAGAGTACCCTCCAAAACAAGAAGAACCTCAGTAGCACGGGGGTGCGTGTGGGGTGGGTTGAGGCCATAGGG
TGCATAGTCGATACGGACTAAAGAGATACCAAGAGTGTTGAGTCCTCTTAATTGGTTAACATTCACTTGAGTGACCTTTGATCCTAGGGGATTTGATGTA
TTTCCGGGTATGTTCAGTCCACGAAAGAGGAAATCATCGGCACTAACCATCTTTGGATCCTTGCAAATCTTTCCATTCA