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Detailed information on CNT30599933


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30487752Fraxinus excelsiorOlea europaea37.9326.188.37344forward

Expression of CNT30599933

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSCKLCISSLVPYFRHRHKAFFYHQQTPSTNSKTRPRKRKKRRENWRY*

Sequence

>CNT30599933
GATTAGGTCTCTCTCTCTCTCTCGCTTTAGCCTGTAGGGGAAGATCAAGAATTAATTTGAGTTTATTTGCAGCTATATAATTTTTGCTTTGGATTTTCCC
CTTATTTTATAGCAAAACACCCGCAGTAATCATCATGTCCTGTAAACTTTGTATTTCATCATTAGTTCCATACTTTCGTCATCGTCACAAGGCATTCTTT
TACCATCAACAAACCCCATCTACGAACTCAAAGACCAGACCAAGAAAAAGGAAGAAAAGGAGAGAAAACTGGAGATATTGAAGATGGGTTCATTGAAGAA
GAGGAAACCCTACTTTCTGTTTCTGATCTTCTTTGAGTCATGAGTCTGCAATGAATTTCTCCTTCTCTCTCTGGGGAATTGAAGCGTGTCGGTCCGGTAT
TTTGCTAGATCAAGCAAATTAATATCTATCTATCTATCTACAAGTCAGTCAAGACTCTTCACTTGTGCACTCAATATGAAGAATCTTTGCTAAATTTGCA
TCTACTTCAAGGAGTTTCCAATAGTTTGTTTTGCTTTAGATATGGTGATTGAAGAACACGGTATGATCATTTCTTAGCATGTGATTTGCTTCTTTTTCTT
TGTTTGAAAATAAATTCATATCCTCTCTCTCTCTCTAGAAGCATAATTACTGGGCTTCTCTTGCTGGCTGTTGTCTGTTTGACCCAATCTAGGTTGGTAT
AAGTTTGTGAAAGCATTAAGAAGGTGATTTCTATGAGCATGTAAGAATACATGTTGTTCTTGAGAACATAAACTGAAATATTTCTATTTGGGTGTATGTA
TTGAATGCTTGTATTAACTAGATTTTTCTGGATCTAGGGTTGGATGTTTCTGTCAGATTTTCATATGTTTTGGCTGTTTGTATTAGTTGGATTTGTCTGA
ATCTAGG