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Detailed information on CNT30599378


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30588198Fraxinus excelsiorMusa acuminata10081.3695.97694forward
CNT30444207Fraxinus excelsiorAegilops tauschii100.1441.0897.99695forward
CNT30132443Fraxinus excelsiorLolium perenne75.2297.7597.89522forward
CNT30369005Fraxinus excelsiorSorghum bicolor99.8644.1798.27693forward
CNT30434125Fraxinus excelsiorPapaver somniferum100.1461.4596.98695reverse complement
CNT30117001Fraxinus excelsiorOryza nivara100.1443.9998.13695forward

Expression of CNT30599378

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKFQRLPGPVGQGYKLVEYISVARVRPRTSKGITDLLLPQTSAA*

Sequence

>CNT30599378
GGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATC
CCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA
AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCTGAGGTCTCGTTCGTTAACGGAATTAAC
CAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGG
TAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCC
CCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGA
CGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAAT