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Detailed information on CNT30599356


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C073|RUB1_DESAN, E-value = 5e-46

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30490421Fraxinus excelsiorOlea europaea99.0519.3990.76314forward

Expression of CNT30599356

Peptides detected in this lncRNA

>peptide 1 (30 aa)
SGGMPSLSWILALTLSMVSELSTSRVIVFP*

>peptide 2 (33 aa)
MSLCWSGGMPSLSWILAFTLSMVSELSTSSVIVF

>peptide 3 (56 aa)
VWWDALLVLDFGLDIINGVGAFNLQGNCFSVRVLTKICIPPLSLSTKWRVLSFWML*

Sequence

>CNT30599356
GTCTGGTGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTGACATTATCAATGGTGTCGGAGCTTTCAACCTCCAGGGTAATTGTTTTTCCGTGAGGGTCT
TGACGAAAATCTGCATTCCACCCCTCAGCCTGAGCACTAAGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGAGTACGGCCATCCTCAAGCTG
TTTACCAGCGAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATGGTGTCTGAGCTTTCCACCTCC
AGTGTGATAGTCTTTCC