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Detailed information on CNT30599339


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30494742Fraxinus excelsiorOlea europaea97.3295.9584.04545forward
CNT30542653Fraxinus excelsiorBrassica napus14.2920.4692.580forward
CNT30236394Fraxinus excelsiorBrassica oleracea14.2921.6292.580forward
CNT3075181Fraxinus excelsiorBrassica juncea14.2921.9292.580forward
CNT30261820Fraxinus excelsiorBrassica rapa14.2925.5692.580forward
CNT30620847Fraxinus excelsiorCajanus cajan14.2922.3597.580forward
CNT30725207Fraxinus excelsiorLupinus angustifolius14.4622.595.0681forward
CNT30115210Fraxinus excelsiorEutrema salsugineum11.7926.8395.4566forward

Expression of CNT30599339

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLRIERPYDICIKSAYEWMHGVLRNHLWLHSF

Sequence

>CNT30599339
TTTCGAGCCTGCCCGTCACGAGAAAAGGCTCGTTAGGAAATTAGGGTTTTGATCGTTATAAATGCCAGCGAGAAGACATTACTCTGTTCGCTTACAGTAT
CACAGCGCGTCTCATCTGTAGTATCGGAGAGTCAGCCAATAGCATCGTGAACAGAGGAAGCCGGTGAGCAAACATGAGAGCTAAGTGGAAGAAGAAGCGA
ATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGACAAAGATCCAAGTAGTGGAGGATAGTAATGGATGGTGAGAATCAAGATAGCTTCTTTTGCATGA
ATCAGTTTCATCTTCATTGGCTGCCCAACGATTAAGAAGAGTGGAAGGAAGTTATGCAGAGGGTGCTGTCTTCTTGTCTGTTCTATCCCTTCTCTATTTC
TTGATTTTATTCGACTTTTTGTTGAAGTTTAGTTTGATTTGTGAGTTTTTACTGTCTACTTTTATGCTACGAATTGAAAGACCGTATGATATTTGTATTA
AATCTGCTTATGAATGGATGCATGGTGTTTTGAGAAATCATTTGTGGCTTCATTCTTTCA