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Detailed information on CNT30599132


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406883Fraxinus excelsiorBeta vulgaris11.1323.359060forward
CNT3018229Fraxinus excelsiorZea mays12.6230.3686.7668reverse complement

Expression of CNT30599132

Peptides detected in this lncRNA

>peptide 1 (32 aa)
FKTLLAIKNFLWFVLVLRRHRVPRVFFHLDLE*

>peptide 2 (29 aa)
MGNSLYIQRICDARTRHFSRHTRVDTTWV*

>peptide 3 (29 aa)
MLGLDISVGIPVSTRHGYEFEIWGESFNF*

Sequence

>CNT30599132
CTTCAAAACTCTTCTAGCAATCAAAAACTTTCTCTGGTTTGTTCTTGTTCTTCGACGACATCGCGTTCCTAGAGTTTTCTTTCACTTAGATTTGGAATGA
GAAACTATCACCCTAGCTAATCCAATTGGGATCCCCTAATCGGGAGGAATAGGCGAAAACTCTCCCACCACCTGAAAGGTTCATCATACAAAAAGATTCT
ACAAGAAGGTAGGCGCCTTAGTCAACTAATGAATGGAACTGCATCTACCCCAAGGAGATGAAATATAAGGCGAACATGGTTCCTCAAACAATGTGATATC
TTACATCGAGTAAATACTTAACCCTTCCTCCTCATACTAAGACTATTGTATAACGCTGCACTTCCGATATTAAAGCTCATCTTGAGACCAAGAGCTTGTG
CCCAAGTACATGGGAAATTCATTATACATACAGAGAATCTGTGATGCTCGGACTCGACATTTCAGTCGGCATACCCGTGTCGACACGACATGGGTATGAG
TTTGAAATATGGGGCGAATCCTTCAATTTTTAAGCGGAT