Detailed information on CNT30599104


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 4e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703592Fraxinus excelsiorQuercus lobata70.4850.3481.08222forward
CNT30617718Fraxinus excelsiorSesamum indicum58.4113.4585.87184forward
CNT30381141Fraxinus excelsiorManihot esculenta31.1118.7483.6798forward
CNT3094104Fraxinus excelsiorSolanum tuberosum70.1637.7181.9221forward
CNT30411806Fraxinus excelsiorPapaver somniferum20.329.9185.9464forward
CNT30725668Fraxinus excelsiorLupinus angustifolius40.6315.6783.59128forward

Expression of CNT30599104

Peptides detected in this lncRNA

>peptide 1 (76 aa)
RYLCPSSLHHSRSLIFQLFNLCRSVLDAAQLLPYSCIPFIHKFPHRGVINLVQSKHEEQEFSHNNRECQVEVKKCL*

>peptide 2 (48 aa)
MRNKNSAIIIGSVKLKSKSACESEKEVAARMTEMDLREEGVRERSWWGF

Sequence

>CNT30599104
CCGATATCTCTGCCCTAGCAGCCTTCATCACAGCCGCAGCCTGATCTTCCAACTGTTTAACCTCTGTAGAAGTGTCCTTGACGCTGCTCAGCTTCTCCCT
TATAGCTGCATCCCTTTCATCCATAAATTTCCCCATAGGGGTGTAATAAATCTTGTCCAAAGCAAACATGAGGAACAAGAATTCAGCCATAATAATAGGG
AGTGTCAAGTTGAAGTCAAAAAGTGCCTGTGAAAGTGAGAAGGAGGTGGCTGCAAGAATGACAGAAATGGACTTGAGGGAAGAAGGGGTCAGAGAGAGGA
GTTGGTGGGGTTTTG