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Detailed information on CNT30598987


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617775Fraxinus excelsiorSesamum indicum8.7139.1297.3259forward
CNT30401703Fraxinus excelsiorBeta vulgaris2.6225.2488.4678forward
CNT30198866Fraxinus excelsiorPisum sativum5.2147.5595.48155forward
CNT30485936Fraxinus excelsiorOlea europaea5.798086.05172reverse complement
CNT30136937Fraxinus excelsiorLolium perenne5.1824.3792.86154forward
CNT3017926Fraxinus excelsiorZea mays5.1840.3195.45154forward
CNT30627895Fraxinus excelsiorDaucus carota4.3742.7697.69130forward
CNT30603929Fraxinus excelsiorOryza punctata2.7920.893.9883reverse complement
CNT3049028Fraxinus excelsiorCucumis sativus3.2333.196.8896forward

Expression of CNT30598987

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MSVLYPEKKELARKLIGGNCKKSINWWRVYQSQYEKIHYFPFLSWKSNPANQIQFHDIIKLSCSLSRFPLSRSELMTRERPVN*

>peptide 2 (46 aa)
MVSCTSSSIQMQLEEKNKAIDLTELVDFVNERENIYYFPVVFLAFF*

>peptide 3 (42 aa)
MSKIEAENDMRIESCKIMMLPRRTYYDYGVWLDYRTISVMIL*

>peptide 4 (39 aa)
MASPLPLAASTNSELNLKAIFRPGXRIFFKCLKYCISSR*

>peptide 5 (38 aa)
MRKRVTTDCLNLKLFLDNLGLFDKTFQFYNYANQQNSNN

>peptide 6 (76 aa)
MFHLSFPFRLFREIYRSIPILSFSLDSFPIEMYRSCSWINENVQKLYLPLPFYESLPFCVWHRHSLWQHPLIRNLI*

>peptide 7 (75 aa)
MIHDLCFIFRFLFVCFEKSIDQFRFFLFLLILFRSRCIDPVHGLTKMCKSSICLCHFMSLFLFAYGIATPFGSIH*

>peptide 8 (62 aa)
MVRAPLNKCGQKRCLIFITVGIEFKLSPTPSHQERHRNFSICSTLNTNPISMKKKKENLLQL*

>peptide 9 (51 aa)
MGQGKPDGLSRQLSEDRENDGDKEKKHEPVARRAETSGSIRDPRLLPGCRR*

Sequence

>CNT30598987
TGTCCAATCATTAATGGACACCTAGATTATTACTAGTAGATTGAATAGCATTGAAATTCTACCCTAAACCGATCGAACCCGAATCAAGTTGGATTGGGTC
CAGCTGGTTTTCTCTCTCAAATATTCCCCAAAAGCCAAACTCAATGTTTTCATTTCTCAGTTACAACAATGGGACAAGGCAAACCCGACGGTTTGAGCCG
GCAACTCTCCGAAGACCGGGAAAATGACGGCGACAAGGAGAAGAAACATGAGCCCGTGGCTCGCCGGGCCGAAACCAGCGGAAGCATAAGGGACCCGAGG
CTGCTGCCCGGTTGTCGACGGTAACGCCGTTGAGCAAGTACAAGCTGCGACAAAGAAGAGTTCGTTGCGAATCAGGACTATTTGTTGAGGTAAGAAGAGT
TCGTTGTGAATTTATTGTTGATTGTTGATAAGGATTAGCTGGAGTCAGGCTGTGCAATTCTTTGTGTGAATTTAGGGTTTTGGAATTGTGGAGCTAGGGT
TTGAGGAATTAGCGTTAGGGGGTATATTTGGGTTTCAATGGGTTGGGTCGGTTTGGGAGGATGAACTGACCCGACCTGGCCTGCAATTATTTTAAATTTA
TTGGGTCGAGTCGATTTTTTGGGTTGTGATTTTCAAGTCCAATCCTACTTGTTTTCCTTCAAGTTTTTTCTTGTCACGAGTTAGTTTATTTGAACATCCA
ATATTCATTTCTCTTCATTCTCACGGCTTATACTTTCTCTCTAAATCAACTTTTTTTCTCAGATTCAAGGAATGAAGATACTACTGAATATACAAAAAAG
TGAAAAAAGTGGAAGAGCTGATCAACAACCTGAGCTCATTAATATCAGGTTGTGAGGATACTGCAGAAGTGAGCTTGGGTATAAAATAAAGATATCTGTA
GACCTTAGGAATATTCAAGAACTTACATATCCGTACATTCTTATGGTATCATGTACTTCATCTTCTATCCAAATGCAATTGGAAGAAAAGAACAAAGCTA
TTGACCTGACTGAATTGGTAGATTTTGTTAACGAAAGGGAAAACATTTATTATTTCCCAGTAGTATTTTTGGCTTTCTTTTAGAGATCGAAATTCAATAC
TTATTTGTTTGTTGGTATTGTGATTTGATATGTATTAAAATTACATGTTGTAAAGCTTTATTTATATTCATGTAAATTGATTATTGCTTTTAAATCTTTC
GCAAGTTTGCTTATTATAACTAGTTTCAACATAGGATACATATTGGATTGATAAAATTCATGTTATCAGTGGTTGTATTAGTTTACCAAGCATATATTTT
GAATCAAATGGTTTTGTTTTTCTTCTGAACTCTATAGTTATGCAATCAGTTTTTTTCTCTGCATGTCAAAAATTGAAGCAGAAAATGATATGCGAATTGA
AAGCTGTAAGATCATGATGTTACCAAGAAGAACATATTACGATTATGGTGTTTGGCTTGACTACAGAACCATCTCAGTGATGATACTTTAAATTACTAAC
CACGACAATGTTTCCTCTTGCAACGACCCGACCTTACGCCGCAGTCGTTATCATATCGTACGTACTGTCCGCTTTGGGATAGCCTAGACCCATCTTACCA
CTCACAGATTTCTGACGCGTCCCCCAGGATTCGAACCCAAGACCTCCATCATATGTGAGACTTAAGTTGAATCCTGGTACCAATTGGAATAGGAACTCGG
AACACAAGCTGGACATGTTGATAGGAGCATGTGCCAGTAAGGGAATAATAGAGCGAGCAATAGGGAATGGTGCGAGCACCGCTGAATAAATGCGGTCAAA
AGCGATGCCTCATATTCATCACTGTAGGAATTGAGTTCAAGCTTTCCCCAACCCCTTCTCATCAAGAAAGGCATAGGAATTTTTCGATATGCAGTACACT
GAACACCAACCCAATCTCGATGAAAAAAAAAAAGGAAAACTTATTGCAACTATGAAAACTGGGAAAAACACATAAGATTTGTTCGCTAGAGCTCATCATT
GAATAATGGTGGCTTGACTTTTTGAACTACCCTTGGAGCTCATCTCTGTGGTATGTCCGTCCTTTATCCCGAGAAGAAAGAGCTCGCGAGAAAGCTCATC
GGTGGAAATTGTAAAAAGTCCATCAATTGGTGGCGGGTTTACCAATCCCAATATGAAAAGATTCACTATTTCCCTTTTCTTTCTTGGAAGAGTAACCCCG
CCAATCAAATCCAGTTTCATGATATTATTAAGCTAAGTTGTTCATTGTCTCGTTTCCCTTTGAGCAGATCAGAGCTAATGACAAGAGAGAGACCAGTTAA
TTAGGGTGCCCGGGGCATGCACTAACTTGGATTGGCTTTTATCCCAAGCCACGGTAGCAAGTCTTCTATGGAGGAAGGAAGCCAGGTATCTCTATAGGCT
TCTCTGAATCCTTTCAATCCATATTTATCTTTGGAATGCTCAGAATTCTACTTGAGCATCTAAATCTGGGTCACTACCAGCAAAAACATCTTTGAACAAG
ATTCTAGCACCATGATCCATGATTTATGTTTCATCTTTCGTTTCCTTTTCGTTTGTTTCGAGAAATCTATCGATCAATTCCGATTCTTTCTTTTTCTCTT
GATTCTTTTCCGATCGAGATGTATAGATCCTGTTCATGGATTAACGAAAATGTGCAAAAGCTCTATTTGCCTCTGCCATTTTATGAGTCTCTTCCTTTTT
GCGTATGGCATCGCCACTCCCTTTGGCAGCATCCACTAATTCGGAACTTAATTTGAAAGCCATATTTCGACCCGGACNGCGCATTTTTTTTAAATGTTTG
AAATATTGTATTTCATCTCGTTAATTTGAATAACGTGCAATTAAAAGGCTTCCAGATGAGGAAGAGGGTCACAACAGACTGCTTAAATCTCAAACTCTTC
TTAGACAATTTAGGTCTTTTTGACAAAACTTTTCAATTTTACAATTACGCAAATCAACAAAACTCTAACAATA