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Detailed information on CNT30598582


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M3K5|CLPP_SPIOL, E-value = 3e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30268958Fraxinus excelsiorChenopodium quinoa91.4640.4994300forward
CNT3045660Fraxinus excelsiorPrunus dulcis88.4169.2191.38290forward
CNT30143841Fraxinus excelsiorMedicago truncatula39.023.9982.81128forward
CNT3060029Fraxinus excelsiorArabidopsis lyrata96.6523.7590.22317forward
CNT3083483Fraxinus excelsiorBrassica juncea97.5675.1288.44320forward
CNT30607170Fraxinus excelsiorGossypium raimondii48.4821.9994.34159forward
CNT30218200Fraxinus excelsiorKalanchoe fedtschenkoi96.6528.1889.91317forward
CNT30655370Fraxinus excelsiorRosa chinensis93.2926.1593.46306forward
CNT30154187Fraxinus excelsiorPrunus persica84.1533.5893.48276forward
CNT30150017Fraxinus excelsiorBrachypodium distachyon22.5635.2485.1474forward

Expression of CNT30598582

Peptides detected in this lncRNA

>peptide 1 (52 aa)
HKLHSIVNSYSRYYPSARRVYKQIQIFGIILDTEIYHKTNKLIRDLAINFLA*

Sequence

>CNT30598582
GCACAAATTGCATAGTATCGTAAATAGCTACTCCAGGTATTACCCATCCGCCAGGAGAGTTTATAAACAAATACAGATCTTTGGTATCATCCTCGATACT
GAGATATACCATAAGACCAATAAGTTGATTCGAGATCTCGCTATCAACTTCTTGGCCTAAAAAAAGTAATCTTTCTCGATAAAGTCGGTTGTATACGTCA
ACCCAAGATGCATCTTCCTCTCCAGGACTTCGGAAAGGTACTTTTGGAACACCAATAGGCATTAATTGAAAGAAAAAAGAACTAAGTACTATATTTTACT
TTGATGTGGAAACGTAACAACATTATTT