Detailed information on CNT30598092


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730376Fraxinus excelsiorCorchorus capsularis8.0525.5684.31102forward

Expression of CNT30598092

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MFGILCMWRKVCFHELSSQSRGVPTSSKS*

>peptide 2 (41 aa)
RPFYSISSKIRGICVLFTTGQESLGGGLSTDLCIFHFLKIR*

>peptide 3 (37 aa)
VPFIPFLQKSEVYVYSSPLVKKALEVGCPLICAYSIS*

>peptide 4 (35 aa)
MFLRLNFQFQLRLFLIDHLQTLPTVPLLFSSIDTR*

>peptide 5 (29 aa)
SLLFHFFKNQRYMCTLHHWSRKPWRWVVH*

>peptide 6 (65 aa)
MSSWIYIYIGGLITFLIYVWYFMHVEKSMFSRVIISIKRGSNEFKIMINSFFKSRCSCTSPSSTC*

Sequence

>CNT30598092
CGTCCCTTTTATTCCATTTCTTCAAAAATCAGAGGTATATGTGTACTCTTCACCACTGGTCAAGAAAGCCTTGGAGGTGGGTTGTCCACTGATTTGTGCA
TATTCCATTTCTTAAAAATAAGATGAGTAGTTGGATATATATATATATTGGGGGGCTCATTACGTTTTTGATCTATGTTTGGTATTTTATGCATGTGGAG
AAAAGTATGTTTTCACGAGTTATCATCTCAATCAAGAGGGGTTCCAACGAGTTCAAAATCATGATCAATTCATTTTTCAAATCCCGCTGCAGCTGTACGA
GCCCTTCCTCTACGTGCTAGAAATGACTTACGAAGAAAAGAATCCTAGAACAAAATAAAAAGGTAGCTAACCAGAGACATAATTATATTGACTGCCTTAA
TCTCGATAGCTACACCACCCACATACTCTTTTGTACACAAAGAGAGCTTAGTCATATGGTAAGATGCTATGATTTTTAGATAAAAGTGTAATGTTCTCTG
TGTATATGCACTGTGCTTCAATGCTCTTGTCATTAGGCATCATCAGAAGGAAATTTTTATGGTGATGATATTCTCAGATTAAGCTTATGTTTCTTAGGCT
TAATTTCCAATTTCAATTGAGACTTTTCTTGATTGACCACCTCCAAACTCTGCCCACTGTCCCTTTATTATTCTCGTCAATTGATACGAGATAAGAATTC
TTTACATTTTTTTTTCTCTATTTTTGATCTTTTACGTAGTTGATAAGATCTGATTCAATGCTATTCTCTTTCTTCTTCTATATGTGCAAGTAAATAAATC
AAAAGCGAATTTAATCACCATCTCAATTTCCTTTTTTTTTTTTTATTCGATTGATTTCTGTTATAGAAATTTGTGTGTGTGTGTGTGTGTTTTTTTTTTG
GTTTCTTGTGCAGTGATAGGAGGTGAAAGGCGTAATGTTTGGGGTTGTAAATTAAGATCAAAGCCGCCATTGGCGCCTCATCTGCTTTGGCATTTTCCTT
AAAATTCGCGGTATATATATGAAGAGTCGTATGTATGTAACCATATCCCTTTGGAACAGGCCAACAGTGACTACTTGATTGCTCTCTGAAGTCTGAAGAG
GTAAAATGGCTTCTTTGATTTGGACGTGTAAAATCTGGAGTCCGTTTGATTCAGATTATTTTCCATGGAAAATGGAAAAAGTATTCTAACTTCCACTTTT
TTGAGTGTTTGATAGCATTTTTTAGGCAATTTGATTTCCTTCTTCTCATTCCCACATGCCATTTTCC