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Detailed information on CNT30598088


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201416Fraxinus excelsiorPisum sativum14.2325.7588.3177reverse complement
CNT3087354Fraxinus excelsiorVigna radiata17.5642.9985.2695reverse complement
CNT30232691Fraxinus excelsiorAnanas comosus16.0825.7486.2187reverse complement
CNT30642420Fraxinus excelsiorCannabis sativa29.3969.1384.28159reverse complement
CNT30322630Fraxinus excelsiorAsparagus officinalis20.75.5491.07112reverse complement
CNT30175669Fraxinus excelsiorVigna angularis17.5625.4786.3295forward

Expression of CNT30598088

Peptides detected in this lncRNA

>peptide 1 (44 aa)
CNTPDQESLRDLIGTTHTNKVHLLFRKSIIRNSTVKRAWPGEIL*

Sequence

>CNT30598088
TGTAATACCCCAGACCAAGAAAGTTTAAGAGATTTGATAGGTACTACTCATACCAACAAGGTGCACCTTCTTTTCCGGAAGTCCATCATTAGAAACTCCA
CAGTTAAGCGAGCTTGGCCTGGAGAAATTCTATGATGGGTGACCCCCTGGGAAGTTTTCTCGGGGAGCGTGCGAGTGAGGACAAAGCATGCTGAAAAGAC
CCATGTTGGTACAGTGGGGACAGTACGTCGTCGATCTAACGGTCGGGACAGCCCGTTAAGTGGGATCCGGGTCGTTACAAATGGTATCAGAGCCGTTTGC
CAGCCGGAAATCGGGAACTAAGTGCTATGCGGGACAAAGTGCTACGCCATAGGACGGGAGCCACCTCTTGAACTCGTAGGAGCCACCTCTAGAATCCCAA
CGCCTGGCAACGGATCCTCAGATGGATCAAGCGCGACGAGGACGTCGCGAGTCTAACGGAGGGTGATTGTAATACCCCAGACCAAGAAAGTTTAAGAGAT
TTGATAGGTACTACTCATACCAACAAGGTACACCTTCTTTT